We have exactly the same policy in all other microns->pixels conversions.

so now every filopodium remembers it. This is useful for generating filo texture later.
Mesh moving and scaling functions were updated to reflect this.

Updated ImportVTK_Ftree() and InitDots_filo() so that the former really only
reads the filo geometry and the latter creates a texture for it.

Filopodia skeleton segments are displayed in OpenGL now by default.

Corrected by dilating the filopodia mask...

that make up a plane in which the filopodia segments bend and connect.

For positioning of dot coordinates into voxels is not used with round() but with floor(), only for cell body dots yet.

The same sampling factor (same variable) is used in the Phase II and III rendering routines.

Added TEXTURE_QUANTIZATION and modified initial texture sampling and rendering (not for filopodia...).
Sampled dots represent voxel centres.

Added aux functions PopulateCube() for rendering.
MOdified ActiveMesh::RenderDots() acoordingly.

Added aux function ExtendSmooth().

- corrected (no holes, is smooth inside),
- still lacks extended FF!

ConstructFF() added missing sanity checks.
ConstructFF_T() more efficient tetrahedron filling added (smarter sweeping step).
ConstructFF_T() disables the extension code for now!

Also, it adds "base triangle fan" to every filopodia -- masks are now rendered correctly.

Blocked for APPLE the read-out of GL_VENDOR etc., which segfaulted.

Reduced smoothing, slightly darker filopodia.
Processed the whole sequence, texture coherency preserved with old/naive FF generator.

Every filopodium has its own, actually.

RenderOneTimeTexture() and the whole thing modified so that cell body
looks similar to overexpressing/02 dataset.
TODO: Filopodia not visible at all, coherent texture!

Merge branch 'ISBI2016_MeshesCompactor' of ssh://xulman@helenos.fi.muni.cz:2200/home/xulman/GIT/meshSurface.git into ISBI2016_TextureRenderer
All now three functionalities were preserved:
generator - for simulating and putting texture on top of meshes
compactor,inspector - joining meshes and viewing them via OpenGL

The need for Lapack was dropped.
reading of VTKs is silent, extra scaling factors were removed.
User stretching parameter for filopida radii introduced.

This one uses the ActiveMesh::VolID.
But old version works actually better due to spatial-overshoot...

Rendering of texture was spit into three phases.

Added one new param to ActiveMesh::ImportVTK_Volumetric()

Gaussian-smoothing-based FF creation finished -- ActiveMesh::ConstructFF()

Removed coordinate scaler (100x) and filopodia radii scaler. The latter is now a parameter to the system with default value of 1.0.

RenderMesh() updates fl. dots position based on the intermediate FF.

Updating does not handle growing filopodia!

Added ActiveMesh::ConstructFF() and ActiveMesh::RotateVolPos().
Finished ActiveMesh::FFDots().
Added GetPixel().

RenderMesh() in main.cpp features coherent texture rendering (but without following mesh deformation...)

Added macro: SAVE_INTERMEDIATE_IMAGES

ISOTROPIC version, first one. Resampled for anisotropic closer to the end.