Commits · f38fc8c8e600a9ad33191d4ece8ae1c49df0ce00 · Visitlab / Chromatin / chromoskein

This project is mirrored from https://github.com/chromoskein/chromoskein.git. Pull mirroring failed Nov 29, 2023.
Repository mirroring has been paused due to too many failed attempts. It can be resumed by a project maintainer or owner.
Last successful update Nov 27, 2023.

Jan 10, 2023
- Fix webGPU bugs. Fix TAD selection bug. · f38fc8c8
  MatusT authored Jan 10, 2023
  
  f38fc8c8
Nov 08, 2022
- Intersection bug fix · 59db90a6
  MatusT authored Nov 08, 2022
  
  59db90a6
- Fix spline (a little). Annotations are now in basepairs. · 23937808
  MatusT authored Nov 08, 2022
  
  23937808
Oct 29, 2022
- modified demo workspace image · b93d7727
  MatusT authored Oct 29, 2022
  
  b93d7727
- new overview example · b8e793b8
  MatusT authored Oct 29, 2022
  
  b8e793b8
- Much faster SASA calculation. Quite fine tracks · 7620805d
  MatusT authored Oct 29, 2022
  
  7620805d
Oct 27, 2022
- Hide labes if they are behind a depth · f190cc6c
  MatusT authored Oct 27, 2022
  
  f190cc6c
- move labels to ordinary variables · 845dac58
  MatusT authored Oct 27, 2022
  
  845dac58
- Color the labels based on color of the markers · f6372072
  David Kouril authored Oct 27, 2022
  
  f6372072
- Merge remote-tracking branch 'origin/main' into main · 3d67daf7
  David Kouril authored Oct 27, 2022
  
  3d67daf7
- Fix typo? Needed to show marker names · 7b6d91b4
  David Kouril authored Oct 27, 2022
  
  7b6d91b4
- Put back UI to enable labels · 0abcbe44
  David Kouril authored Oct 27, 2022
  
  0abcbe44
- Marker labels: project positions to screen space · 2f33613b
  David Kouril authored Oct 27, 2022
  
  2f33613b
- Fix distance map · 68bb0c9a
  Matus Talcik authored Oct 27, 2022
  
  68bb0c9a
Oct 26, 2022
- prepare playground for David to make labels · 22f0afee
  MatusT authored Oct 26, 2022
  
  22f0afee
- working tad selections · 8d44e351
  Matus Talcik authored Oct 26, 2022
  
  8d44e351
Oct 25, 2022
- tracks basically done · ff463609
  MatusT authored Oct 25, 2022
  
  ff463609
- Merge branch 'main' of https://github.com/chromoskein/chromoskein · a867dccb
  Matus Talcik authored Oct 25, 2022
  
  a867dccb
- lay foundations for tracks · 75d02dba
  Matus Talcik authored Oct 25, 2022
  
  75d02dba
- fixes · 87a133f0
  Matus Talcik authored Oct 25, 2022
  
  87a133f0
Oct 14, 2022
- shaders · 19db7566
  Matus Talcik authored Oct 14, 2022
  
  19db7566
- More beautiful TAD color, some fixes · 0c1b295b
  Matus Talcik authored Oct 14, 2022
  
  0c1b295b
Sep 30, 2022
- reduce ssao · 279387bb
  Matus Talcik authored Sep 30, 2022
  
  279387bb
Sep 26, 2022
- better distance map · 8db9ca61
  Matus Talcik authored Sep 26, 2022
  
  8db9ca61
- 3d sasa + better 2d viewport · 052c99a1
  Matus Talcik authored Sep 26, 2022
  
  052c99a1
Sep 13, 2022
- Merge pull request #26 from chromoskein/overlapping-data · 85af6f4c
  Matus Talcik authored Sep 13, 2022
```
Overlapping data
```
  85af6f4c
Sep 12, 2022
- switch to using quantiles · 99907970
  Matus Talcik authored Sep 12, 2022
  
  99907970
Sep 08, 2022
- Fix few bugs here and there · f04c9f90
  Matus Talcik authored Sep 08, 2022
  
  f04c9f90
Aug 23, 2022
- initial support for culling-resistible selections · 4f938ce5
  Matus Talcik authored Aug 23, 2022
  
  4f938ce5
- connectivity is restored · ad36dfbb
  Matus Talcik authored Aug 23, 2022
  
  ad36dfbb
Aug 22, 2022
- automatically create selections of chromosomes when found in file · f499ae63
  Matus Talcik authored Aug 22, 2022
  
  f499ae63
Aug 17, 2022
- Finish branch · e950aba2
  Matus Talcik authored Aug 17, 2022
  
  e950aba2
- Fix almost everything around selections. Disable David's labels for now. · 8c8d9fb8
  Matus Talcik authored Aug 17, 2022
  
  8c8d9fb8
- fix bugs here and there · 3534d5f1
  Matus Talcik authored Aug 17, 2022
  
  3534d5f1
Aug 16, 2022
- Bring back selections and tooltips · 2d2bfef4
  Matus Talcik authored Aug 16, 2022
  
  2d2bfef4
Aug 15, 2022
- working overlaying data with specific settings · f17a6bd3
  Matus Talcik authored Aug 15, 2022
  
  f17a6bd3
Aug 11, 2022
- changes · a652dd1d
  Matus Talcik authored Aug 11, 2022
  
  a652dd1d
- Chromoskein compiles with multiple data per viewport in storage · 268616e0
  Matus Talcik authored Aug 11, 2022
  
  268616e0
Aug 02, 2022
- density and sasa are configurable from the viewport options · bc29867e
  kiraacorsac authored Aug 02, 2022
  
  bc29867e
Jul 29, 2022

Temporary fix: sometimes pass for certain id gives result for another · 121191b8

David Kouril authored Jul 29, 2022

In the end there would be two labels created for one selection ID...probably there's some issue with default value in the GPU implementation

121191b8