example.dtx

  \label{fig:mulogo1}
\end{figure}

\begin{figure}
  \begin{center}
    \begin{minipage}{.66\textwidth}
      \includegraphics[width=\textwidth]{fithesis/logo/mu/fithesis-base.pdf}
    \end{minipage}
    \begin{minipage}{.33\textwidth}
      \includegraphics[width=\textwidth]{fithesis/logo/mu/fithesis-base.pdf} \\
      \includegraphics[width=\textwidth]{fithesis/logo/mu/fithesis-base.pdf}
    \end{minipage}
  \end{center}
%<*econ>
  \emph{Source: <<Image Source>>}
%</econ>
	\caption{The logo of the \acrlong{MUNI} at $\frac23$ and
    $\frac13$ of text width}
  \label{fig:mulogo2}
\end{figure}

\begin{table}
  \begin{tabularx}{\textwidth}{lllX}
    \toprule
    Day & Min Temp & Max Temp & Summary \\
    \midrule
    Monday & $13^{\circ}\mathrm{C}$ & $21^\circ\mathrm{C}$ & A
    clear day with low wind and no adverse current advisories. \\
    Tuesday & $11^{\circ}\mathrm{C}$ & $17^\circ\mathrm{C}$ & A
    trough of low pressure will come from the northwest. \\
    Wednesday & $10^{\circ}\mathrm{C}$ &
    $21^\circ\mathrm{C}$ & Rain will spread to all parts during the
    morning. \\
    \bottomrule
  \end{tabularx}
%<*econ>
  \vskip\abovecaptionskip\emph{Source: <<Table Source>>}
%</econ>
  \caption{A weather forecast}
  \label{tab:weather}
\end{table}

The logo of the Masaryk University is shown in Figure
\ref{fig:mulogo1} and Figure \ref{fig:mulogo2} at pages
\pageref{fig:mulogo1} and \pageref{fig:mulogo2}. The weather
forecast is shown in Table \ref{tab:weather} at page
\pageref{tab:weather}. The following chapter is Chapter
\ref{chap:matheq} and starts at page \pageref{chap:matheq}.
Items \ref{item:star1}, \ref{item:star2}, and
\ref{item:star3} are starred in the following list:
\begin{compactenum}
  \item some text
  \item some other text
  \item $\star$ \label{item:star1}
  \begin{compactenum}
    \item some text
    \item $\star$ \label{item:star2}
    \item some other text
    \begin{compactenum}
      \item some text
      \item some other text
      \item yet another piece of text
      \item $\star$ \label{item:star3}
    \end{compactenum}
    \item yet another piece of text
  \end{compactenum}
  \item yet another piece of text
\end{compactenum}
If your reference points to a place that has not yet been typeset,
the \verb"\ref" command will expand to \textbf{??} during the first
run of
%<*pdftex>
\texttt{pdflatex \jobname.tex}
%</pdftex>
%<*luatex>
\texttt{lualatex \jobname.tex}
%</luatex>
and a second run is going to be needed for the references to
resolve. With online services -- such as \Gls{Overleaf} -- this is
performed automatically.

\chapter{Mathematical equations}
\label{chap:matheq}
\TeX{} comes pre-packed with the ability to typeset inline
equations, such as $\mathrm{e}^{ix}=\cos x+i\sin x$, and display
equations, such as \[
  \mathbf{A}^{-1} = \begin{bmatrix}
  a & b \\ c & d \\ 
  \end{bmatrix}^{-1} =
  \frac{1}{\det(\mathbf{A})} \begin{bmatrix}
  \,\,\,d & \!\!-b \\ -c & \,a \\ 
  \end{bmatrix} =
  \frac{1}{ad - bc} \begin{bmatrix}
  \,\,\,d & \!\!-b \\ -c & \,a \\ 
  \end{bmatrix}.
\] \LaTeX{} defines the automatically numbered \texttt{equation}
environment:
\begin{equation}
  \gamma Px = PAx = PAP^{-1}Px.
\end{equation}
The package \textsf{amsmath} provides several additional
environments that can be used to typeset complex equations:
\begin{enumerate}
  \item An equation can be spread over multiple lines using the
    \texttt{multline} environment:
    \begin{multline}
      a + b + c + d + e + f + b + c + d + e + f + b + c + d + e +
f \\
      + f + g + h + i + j + k + l + m + n + o + p + q
    \end{multline}

  \item Several aligned equations can be typeset using the
    \texttt{align} environment:
    \begin{align}
              a + b &= c + d     \\
                  u &= v + w + x \\[1ex]
      i + j + k + l &= m
    \end{align}

  \item The \texttt{alignat} environment is similar to
    \texttt{align}, but it doesn't insert horizontal spaces between
    the individual columns:
    \begin{alignat}{2}
      a + b + c &+ d       &   &= 0 \\
              e &+ f + g   &   &= 5
    \end{alignat}

  \item Much like chapter, sections, tables, figures, or list
    items, equations -- such as \eqref{eq:first} and
    \eqref{eq:mine} -- can also be labeled and referenced:
    \begin{alignat}{4}
      b_{11}x_1 &+ b_{12}x_2  &  &+ b_{13}x_3  &  &             &
        &= y_1,                   \label{eq:first} \\
      b_{21}x_1 &+ b_{22}x_2  &  &             &  &+ b_{24}x_4  &
        &= y_2. \tag{My equation} \label{eq:mine}
    \end{alignat}

  \item The \texttt{gather} environment makes it possible to
    typeset several equations without any alignment:
    \begin{gather}
      \psi = \psi\psi, \\
      \eta = \eta\eta\eta\eta\eta\eta, \\
      \theta = \theta.
    \end{gather}

  \item Several cases can be typeset using the \texttt{cases}
    environment:
    \begin{equation}
      |y| = \begin{cases}
        \phantom-y & \text{if }z\geq0, \\
                -y & \text{otherwise}.
      \end{cases}
    \end{equation}
\end{enumerate}
For the complete list of environments and commands, consult the
\textsf{amsmath} package manual\footnote{
  See \url{http://mirrors.ctan.org/macros/latex/required/amsmath/amsldoc.pdf}.
  The \texttt{\textbackslash url} command is provided by the
  package \textsf{url}.
}.

\chapter{\textnormal{We \textsf{have} \texttt{several} \textsc{fonts}
  \textit{at} \textbf{disposal}}}
The serified roman font is used for the main body of the text.
\textit{Italics are typically used to denote emphasis or
quotations.} \texttt{The teletype font is typically used for source
code listings.} The \textbf{bold}, \textsc{small-caps} and
\textsf{sans-serif} variants of the base roman font can be used to
denote specific types of information.

\tiny We \scriptsize can \footnotesize also \small change \normalsize
the \large font \Large size, \LARGE although \huge it \Huge
is \huge usually \LARGE not \Large necessary.\normalsize

A wide variety of mathematical fonts is also available, such as: \[
  \mathrm{ABC}, \mathcal{ABC}, \mathbf{ABC}, \mathsf{ABC},
  \mathit{ABC}, \mathtt{ABC}
\] By loading the \textsf{amsfonts} packages, several additional
fonts will become available: \[
  \mathfrak{ABC}, \mathbb{ABC}
\] Many other mathematical fonts are available\footnote{
  See \url{http://tex.stackexchange.com/a/58124/70941}.
}.

\chapter{Inserting the bibliography}
After linking a bibliography data\-base files to the document using
the \verb"\"\texttt{thesis\discretionary{-}{}{}setup\{bib\discretionary{=}{=}{=}%
\{\textit{file1},\textit{file2},\,\ldots\,\}\}} command, you can
start citing the entries. This is just dummy text
\parencite{borgman03} lightly sprinkled with citations
\parencite[p.~123]{greenberg98}. Several sources can be cited at
once: \cite{borgman03,greenberg98,thanh01}.
\citetitle{greenberg98} was written by \citeauthor{greenberg98} in
\citeyear{greenberg98}. We can also produce \textcite{greenberg98}%
%<*fi,ped,phil,sci>
\ or %% Let us define a compound command:
\def\citeauthoryear#1{(\textcite{#1},~\citeyear{#1})}%
\citeauthoryear{greenberg98}%
%</fi,ped,phil,sci>
. The full bibliographic citation is:
\emph{\fullcite{greenberg98}}. We can easily insert a bibliographic
citation into the footnote\footfullcite{greenberg98}.

The \verb"\nocite" command will not generate any
output\nocite{muni}, but it will insert its arguments into
the bibliography. The \verb"\nocite{*}" command will insert all the
records in the bibliography database file into the bibliography.
Try uncommenting the command
%% \nocite{*}
and watch the bibliography section come apart at the seams.

When typesetting the document for the first time, citing a
\texttt{work} will expand to [\textbf{work}] and the
\verb"\printbibliography" command will produce no output. It is now
necessary to generate the bibliography by running \texttt{biber
\jobname.bcf} from the command line and then by typesetting the
document again twice. During the first run, the bibliography
section and the citations will be typeset, and in the second run,
the bibliography section will appear in the table of contents.

The \texttt{biber} command needs to be executed from within the
directory, where the \LaTeX\ source file is located. In Windows,
the command line can be opened in a directory by holding down the
\textsf{Shift} key and by clicking the right mouse button while
hovering the cursor over a directory.  Select the \textsf{Open
Command Window Here} option in the context menu that opens shortly
afterwards.

With online services -- such as Overleaf -- or when using an
automatic tool -- such as \LaTeX MK -- all commands are executed
automatically. When you omit the \verb"\printbibliography" command,
its location will be decided by the template.

%<*fsps>
  {\singlespacing
%</fsps>
  \printbibliography[heading=bibintoc] %% Print the bibliography.
%<*fsps>
  }
%</fsps>

\chapter{Inserting the index}
After using the \verb"\makeindex" macro and loading the
\texttt{makeidx} package that provides additional indexing
commands, index entries can be created by issuing the \verb"\index"
command. \index{dummy text|(}It is possible to create ranged index
entries, which will encompass a span of text.\index{dummy text|)}
To insert complex typographic material -- such as $\alpha$
\index{alpha@$\alpha$} or \TeX{} \index{TeX@\TeX} --
into the index, you need to specify a text string, which will
determine how the entry will be sorted. It is also possible to
create hierarchal entries. \index{vehicles!trucks}
\index{vehicles!speed cars}

After typesetting the document, it is necessary to generate the
index by running
\begin{center}%
  \texttt{texindy -I latex -C utf8 -L }$\langle$\textit{locale}%
  $\rangle$\texttt{ \jobname.idx}
\end{center}
from the command line, where $\langle$\textit{locale}$\rangle$
corresponds to the main locale of your thesis -- such as
\texttt{english}, and then typesetting the document again.

The \texttt{texindy} command needs to be executed from within the
directory, where the \LaTeX\ source file is located. In Windows,
the command line can be opened in a directory by holding down the
\textsf{Shift} key and by clicking the right mouse button while
hovering the cursor over a directory. Select the \textsf{Open Command
Window Here} option in the context menu that opens shortly
afterwards.

With online services -- such as Overleaf -- the commands are
executed automatically, although the locale may be erroneously
detected, or the \texttt{makeindex} tool (which is only able to
sort entries that contain digits and letters of the English
alphabet) may be used instead of \texttt{texindy}. In either case,
the index will be ill-sorted.

  \makeatletter\thesis@blocks@clear\makeatother
  \phantomsection %% Print the index and insert it into the
  \addcontentsline{toc}{chapter}{\indexname} %% table of contents.
  \printindex
%<*econ>

\makeatletter
  \thesis@postamble %% Print the postamble.
\makeatother
%</econ>

\appendix %% Start the appendices.
\chapter{An appendix}
Here you can insert the appendices of your thesis.

\end{document}
%    \end{macrocode}