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#include <list>
#include <string.h>
#include <stdlib.h> //for atoi()
#include "params.h"
#include "graphics.h"
#include "../cmath3d/TriangleMesh.h"
//create some shared objects...
ParamsClass params;
void ParamsSetup(void);
//
ActiveMesh mesh;
int main(void)
{
ParamsSetup();
//load mesh
//char filename[]="/home/cbia/prace/zerial_pc/DATA/Liver/3dliver--dataForCheckNeighborsFunctions/samplecell.stl";
char filename[]="/home/cbia/prace/zerial_pc/DATA/MT_testingAlgorithms/MeshLab/torus_100_30.stl";
int retval=mesh.ImportSTL(filename);
if (! retval)
{
std::cout << "some error reading file: " << retval << "\n";
return(1);
}
std::cout << "mesh: " << filename << "\n";
std::cout << "vertices #: " << mesh.Pos.size() << "\n";
std::cout << "triangles #: " << mesh.ID.size()/3 << "\n";
std::cout << "normals #: " << mesh.norm.size() << "\n";
mesh.CenterMesh(params.sceneCentre);
//work with mesh
initializeGL();
loopGL();
closeGL();
return(0);
}
void ParamsSetup(void)
{
//set up the environment
params.sceneOffset=Vector3d<float>(0.f);
params.sceneSize=Vector3d<float>(15.f,15.f,15.f); //az se vyladi sily mezi nima
params.sceneCentre=params.sceneSize;
params.sceneCentre/=2.0f;
params.sceneCentre+=params.sceneOffset;
params.sceneOuterBorder=Vector3d<float>(1.f);
params.sceneBorderColour.r=0.5f;
params.sceneBorderColour.g=0.5f;
params.sceneBorderColour.b=0.5f;
params.inputCellsFilename="cells/cell%d.txt";
params.numberOfAgents=2;
params.friendshipDuration=10.f;
params.maxCellSpeed=0.20f;
//adapted for cell cycle length of 24 hours
params.cellCycleLength=14.5*60; //[min]
params.currTime=0.f; //all three are in units of minutes
params.incrTime=0.1f;
params.stopTime=5000.f;
params.imgSizeX=500; //pixels
params.imgSizeY=500;
params.imgResX=1.0f; //pixels per micrometer
params.imgResY=1.0f;
params.imgOutlineFilename="Outline%05d.tif";
params.imgPhantomFilename="Phantom%05d.tif";
params.imgMaskFilename="Mask%05d.tif";
params.imgFluoFilename="FluoImg%05d.tif";
params.imgPhCFilename="PhCImg%05d.tif";
params.tracksFilename="tracks.txt";
}