Commits · main · Visitlab / Chromatin / chromoskein

This project is mirrored from https://github.com/chromoskein/chromoskein.git. Pull mirroring failed Nov 29, 2023.
Repository mirroring has been paused due to too many failed attempts. It can be resumed by a project maintainer or owner.
Last successful update Nov 27, 2023.

May 15, 2023
- Some performance optimizations · 196cc288
  Matus Talcik authored May 15, 2023
  
  196cc288
Mar 28, 2023
- Less SSAO samples. Transparency fix. Constant recomputation of SASA fix. · 699f0b90
  MatusT authored Mar 28, 2023
  
  699f0b90
Mar 21, 2023
- Switch to Orbit camera, because it has smaller amount of issues. Fix one last... · 263f03d1
  MatusT authored Mar 21, 2023
```
Switch to Orbit camera, because it has smaller amount of issues. Fix one last performance bug: distance viewport starts drawing at LOD 0 causing gpu hang
```
  263f03d1
- Update to latest WebGPU. Fix bugs in distance viewport configuration panel.... · 46c66a18
  Matus Talcik authored Mar 21, 2023
```
Update to latest WebGPU. Fix bugs in distance viewport configuration panel. Move distance map computation to web worker for much faster loading
```
  46c66a18
- Renewed Token · a5239b84
  Matus Talcik authored Mar 21, 2023
  
  a5239b84
Jan 10, 2023
- Fix webGPU bugs. Fix TAD selection bug. · f38fc8c8
  MatusT authored Jan 10, 2023
  
  f38fc8c8
Nov 08, 2022
- Intersection bug fix · 59db90a6
  MatusT authored Nov 08, 2022
  
  59db90a6
- Fix spline (a little). Annotations are now in basepairs. · 23937808
  MatusT authored Nov 08, 2022
  
  23937808
Oct 29, 2022
- modified demo workspace image · b93d7727
  MatusT authored Oct 29, 2022
  
  b93d7727
- new overview example · b8e793b8
  MatusT authored Oct 29, 2022
  
  b8e793b8
- Much faster SASA calculation. Quite fine tracks · 7620805d
  MatusT authored Oct 29, 2022
  
  7620805d
Oct 27, 2022
- Hide labes if they are behind a depth · f190cc6c
  MatusT authored Oct 27, 2022
  
  f190cc6c
- move labels to ordinary variables · 845dac58
  MatusT authored Oct 27, 2022
  
  845dac58
- Color the labels based on color of the markers · f6372072
  David Kouril authored Oct 27, 2022
  
  f6372072
- Merge remote-tracking branch 'origin/main' into main · 3d67daf7
  David Kouril authored Oct 27, 2022
  
  3d67daf7
- Fix typo? Needed to show marker names · 7b6d91b4
  David Kouril authored Oct 27, 2022
  
  7b6d91b4
- Put back UI to enable labels · 0abcbe44
  David Kouril authored Oct 27, 2022
  
  0abcbe44
- Marker labels: project positions to screen space · 2f33613b
  David Kouril authored Oct 27, 2022
  
  2f33613b
- Fix distance map · 68bb0c9a
  Matus Talcik authored Oct 27, 2022
  
  68bb0c9a
Oct 26, 2022
- prepare playground for David to make labels · 22f0afee
  MatusT authored Oct 26, 2022
  
  22f0afee
- working tad selections · 8d44e351
  Matus Talcik authored Oct 26, 2022
  
  8d44e351
Oct 25, 2022
- tracks basically done · ff463609
  MatusT authored Oct 25, 2022
  
  ff463609
- Merge branch 'main' of https://github.com/chromoskein/chromoskein · a867dccb
  Matus Talcik authored Oct 25, 2022
  
  a867dccb
- lay foundations for tracks · 75d02dba
  Matus Talcik authored Oct 25, 2022
  
  75d02dba
- fixes · 87a133f0
  Matus Talcik authored Oct 25, 2022
  
  87a133f0
Oct 14, 2022
- shaders · 19db7566
  Matus Talcik authored Oct 14, 2022
  
  19db7566
- More beautiful TAD color, some fixes · 0c1b295b
  Matus Talcik authored Oct 14, 2022
  
  0c1b295b
Sep 30, 2022
- reduce ssao · 279387bb
  Matus Talcik authored Sep 30, 2022
  
  279387bb
Sep 26, 2022
- better distance map · 8db9ca61
  Matus Talcik authored Sep 26, 2022
  
  8db9ca61
- 3d sasa + better 2d viewport · 052c99a1
  Matus Talcik authored Sep 26, 2022
  
  052c99a1
Sep 13, 2022
- Merge pull request #26 from chromoskein/overlapping-data · 85af6f4c
  Matus Talcik authored Sep 13, 2022
```
Overlapping data
```
  85af6f4c
Sep 12, 2022
- switch to using quantiles · 99907970
  Matus Talcik authored Sep 12, 2022
  
  99907970
Sep 08, 2022
- Fix few bugs here and there · f04c9f90
  Matus Talcik authored Sep 08, 2022
  
  f04c9f90
Aug 23, 2022
- initial support for culling-resistible selections · 4f938ce5
  Matus Talcik authored Aug 23, 2022
  
  4f938ce5
- connectivity is restored · ad36dfbb
  Matus Talcik authored Aug 23, 2022
  
  ad36dfbb
Aug 22, 2022
- automatically create selections of chromosomes when found in file · f499ae63
  Matus Talcik authored Aug 22, 2022
  
  f499ae63
Aug 17, 2022
- Finish branch · e950aba2
  Matus Talcik authored Aug 17, 2022
  
  e950aba2
- Fix almost everything around selections. Disable David's labels for now. · 8c8d9fb8
  Matus Talcik authored Aug 17, 2022
  
  8c8d9fb8
- fix bugs here and there · 3534d5f1
  Matus Talcik authored Aug 17, 2022
  
  3534d5f1
Aug 16, 2022
- Bring back selections and tooltips · 2d2bfef4
  Matus Talcik authored Aug 16, 2022
  
  2d2bfef4