Commits · MitoGen_noTools · Vladimír Ulman / ofTools · GitLab

Feb 23, 2017
- A new repository for MitoGen framework has just been created ;-) · 25fd6617
  David Svoboda authored Apr 01, 2016
  View commits for tag MitoGen_noTools MitoGen_noTools
  25fd6617
- cleaned up before pulling/rebasing here a continuation branch · 20340986
  Vladimír Ulman authored Feb 23, 2017
  
  20340986
Apr 01, 2016
- Changes in headings of individual files. Removal of some TODOs. · 1d6e5b85
  David Svoboda authored Apr 01, 2016
  View commits for tag MitoGen MitoGen
  1d6e5b85
Nov 18, 2015
- Added displacement distribution handling, a process similar to turning angles distribution. · efa2d706
  Vladimír Ulman authored Nov 18, 2015
  efa2d706
Nov 13, 2015
- Added guarding macros to have easier control on what is produced from the program. · 76bb4d29
  Vladimír Ulman authored Nov 13, 2015
  76bb4d29
- Added export for MSD analysis. · f46ded4f
  Vladimír Ulman authored Nov 13, 2015
  f46ded4f
- New rnd walkers based on arbitrary turning angle distribution. · 1621a1bb
  Vladimír Ulman authored Nov 13, 2015
  1621a1bb
Nov 09, 2015
- Added the first version of the random walks class. · cc9ba6ae
  Vladimír Ulman authored Nov 09, 2015
  cc9ba6ae
Jul 29, 2015
- Random generators now have their seeds dependent both on time and process ID. · 2c8fc8f4
  Vladimír Ulman authored Jul 29, 2015
  2c8fc8f4
Jul 11, 2015
- Some patching.... · f1356dd5
  Vladimír Ulman authored Jul 11, 2015
  f1356dd5
Jul 10, 2015
- Bug fix in the Rendering functions. · f320017e
  Vladimír Ulman authored Jul 10, 2015
  f320017e
Jul 03, 2015
- Some report was made a debug report... · e8a076ed
  Vladimír Ulman authored Jul 03, 2015
  e8a076ed
- Added Cell::ChrCentrosomesMove[BM]() function to move both centrosomes (if they exists). · b968fa96
  Vladimír Ulman authored Jul 03, 2015
  b968fa96
Jul 02, 2015
- Configuration that has been used for calculating · 6e8d9cda
  Vladimír Ulman authored Jul 02, 2015
  6e8d9cda
- Mainly bug fixes and extended reports... · 7259f1d4
  Vladimír Ulman authored Jul 02, 2015
  7259f1d4
- Now also report size of image it would take when loaded into RAM. · 173c9169
  Vladimír Ulman authored Jul 02, 2015
  173c9169
May 10, 2015
- M src/tools/graytogray.cpp - Bugfix · 6224152f
  Vladimír Ulman authored May 10, 2015
  
  6224152f
May 06, 2015
- Updated all configs with the [sofa] section (which is used only · 0cb69ff2
  Vladimír Ulman authored May 06, 2015
  0cb69ff2
May 05, 2015
- Added now-commented-out code to export the pnHints image on hard drive. · d2c780a7
  Vladimír Ulman authored May 05, 2015
  d2c780a7
Jan 28, 2015
- Added similar tool. This one, however, operates on XZ-plane (y-coordinate fixed). · 0369e98f
  Vladimír Ulman authored Jan 28, 2015
  0369e98f
Jan 27, 2015
- The tool now also outputs image with average vector lenghts · d01a90b4
  Vladimír Ulman authored Jan 27, 2015
  d01a90b4
- Adjusted to remove compiler warning. · 30a495b2
  Vladimír Ulman authored Jan 27, 2015
  30a495b2
- Added a new tool: calc2DFFfromChrPoints for producing a flow field from chrPoints text files. · fdd3611f
  Vladimír Ulman authored Jan 27, 2015
  fdd3611f
- When export of flow fields is enabled in the CMake, · a3b91581
  Vladimír Ulman authored Jan 27, 2015
  a3b91581
Nov 29, 2014
- Added: · d5c27bfd
  Vladimír Ulman authored Nov 29, 2014
  d5c27bfd
Nov 28, 2014
- Relatively re-worked the rigid movement part. · b5ecba8d
  Vladimír Ulman authored Nov 28, 2014
  b5ecba8d
- Added a lot nicer movement of cells. It is based on considering cell · d4446411
  Vladimír Ulman authored Nov 28, 2014
  d4446411
Nov 27, 2014
- Added a new cell descriptor: Cell::scmCellPolarityVector. · bb74da54
  Vladimír Ulman authored Nov 27, 2014
  bb74da54
Nov 26, 2014
- Added support for the SOFA crippled export mode -- · 78ea39a1
  Vladimír Ulman authored Nov 26, 2014
  78ea39a1
- Added some tuning to RandomWalk (chromatin initial shape) · 86b6c217
  Vladimír Ulman authored Nov 26, 2014
  86b6c217
- Added two more testing modes into territories rendering · 818b71ce
  Vladimír Ulman authored Nov 26, 2014
  818b71ce
Nov 21, 2014
- Added rigid movement of cells with SOFA. · 6d550efc
  Vladimír Ulman authored Nov 21, 2014
  6d550efc
Nov 20, 2014
- M src/cell.cpp - added a patch to move cell phantom to the reference · e4916ceb
  Vladimír Ulman authored Nov 20, 2014
  e4916ceb
- Introduced the so called reference position of each cell · 9c8c7aaa
  Vladimír Ulman authored Nov 20, 2014
  9c8c7aaa
- M src/toolbox/bp_lists.cpp - all three mask rendering functions include now · fe341934
  Vladimír Ulman authored Nov 20, 2014
  fe341934
- Added import of some simulator data from the SOFA, when SOFA enabled in · 73a25434
  Vladimír Ulman authored Nov 20, 2014
  73a25434
- Added Scheduler::SOFA_InitialExport() function that only iteratively · e81a0f88
  Vladimír Ulman authored Nov 20, 2014
  e81a0f88
- The ImportAndResetPointList() has now a parameter more that · cedfc1af
  Vladimír Ulman authored Nov 20, 2014
  cedfc1af
- Added two functions Cell::SOFA_InitialExport() and Cell::SOFA_NextImport(), · d515ee65
  Vladimír Ulman authored Nov 20, 2014
  d515ee65
- The scheduler now has its own Scheduler::GetPhaseFrameBudget() function · cd4a9377
  Vladimír Ulman authored Nov 20, 2014
  cd4a9377