Configuration that has been used for calculating

velocity/movement stuff for the TMI paper.

This was run on eight instances in paralel (givin 40 initial cells).
A    TMI
A    TMI/config-711extVOI-highSNR.ini
AM   TMI/initial_mask_7-11_extended.tif

The restarting of chromatin was disabled by RESTART_PERIOD=1000.
Cell cycle has increased length variability.
M    src/cell.h

Disabled some stats reporting functions.
M    src/cellChr.cpp

Velocity span increased.
M    src/cellScm.cpp

Only 2x noFramesPerCellCycle should be generated.
M    src/main.cpp

Added tweak to avoid having auxiliarly images greater than sceneMasks.
M    src/toolbox/bp_lists.cpp

CMAKE options:
BUILD_STATIC                     OFF                                                                                         
CMAKE_INSTALL_PREFIX             /usr/local                                                                                  
DEBUG_VERSION                    ON                                                                                          
DOCUMENTATION                    OFF                                                                                         
DO_EVENTS_SYNCHRONIZED           OFF                                                                                         
DO_FLAT_2DMOTION                 ON                                                                                          
DO_MULTITHREADING                ON                                                                                          
DO_NONRIGID_MOTION               OFF                                                                                         
DO_PHOTOBLEACHING                OFF                                                                                         
DO_RIGID_MOTION                  ON                                                                                          
ENABLE_NUCLEOLI                  OFF                                                                                         
HIGH_SNR                         ON                                                                                          
INC_CYTOPACQ                     /usr/local/include                                                                          
INC_GSL                          /usr/include                                                                                
INC_I3D                          /usr/local/include                                                                          
INC_INIPARSER                    /usr/local/include                                                                          
LIB_ACQUIGEN                     /usr/local/lib/libacquigen.so                                                               
LIB_CYTOGEN                      /usr/local/lib/libcytogen.so                                                                
LIB_DL                           /usr/lib/x86_64-linux-gnu/libdl.so                                                          
LIB_FFTW_SINGLE                  /usr/lib/x86_64-linux-gnu/libfftw3f.so                                                      
LIB_FFTW_SINGLE_THREADS          /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so                                              
LIB_GSL                          /usr/lib/libgsl.so                                                                          
LIB_I3DALGO                      /usr/local/lib/libi3dalgo.so                                                                
LIB_I3DCORE                      /usr/local/lib/libi3dcore.so                                                                
LIB_INIPARSER                    /usr/local/lib/libiniparser.so                                                              
LIB_OPTIGEN                      /usr/local/lib/liboptigen.so                                                                
SAVE_ANISOTROPIC_GT              OFF                                                                                         
SAVE_FINAL                       OFF                                                                                         
SAVE_FLOWFIELDS                  OFF                                                                                         
SAVE_NUCLEI                      OFF                                                                                         
SAVE_TIFFS                       OFF                                                                                         
SHOW_CENTRES                     OFF                                                                                         
SHOW_TERRITORIES                 OFF                                                                                         
SOFA_CONNECTOR                   OFF                                                                                         
USE_REAL_PSF                     OFF