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Created with Raphaël 2.2.015Jul1413115225Jun21201918171312111094331May29282321201716151411108763230Apr29262423221917161514116328Mar27262522201513127625Feb171514131211872131Jan30292524232221201817161514111097317Dec161413121110976543230Nov2928232221201916151413129623Oct221815985329Sep272625242221201918151413128Improved conditional execution of regtestsAdded "has" toolsMerge branch 'v2.0' into v2.0-hrexFixed make install with staticMade a variable protected rather than privateAdded MW cite and docsAdded script for partial tempering on gromacs topologiesAdded patch for Hamiltonian replica exchange in GROMACSMerge branch 'v2.0' into internal-lapackAdded framework to use driver on multiple trajectoriesMetad: read an external potentialretrieve the bias from outsideFixed outfile in case of no communicatorbug in FAKE colvar affecting sum hillsFixed a typo in the manualMerge branch 'master' of git.assembla.com:plumed2Merge branch 'v2.0'Merge branch 'fixing-nlist' into v2.0Fixed neighborlistSmall fix to alphabetaMerge branch 'master' of git.assembla.com:plumed2cs2back examplecs2back gromacs examplecs2back gromacs examplecs2back gromacs exampleCS2Backbone: a lot of more documentationCSBackbone - more documentationMerge branch 'v2.0' of git.assembla.com:plumed2 into v2.0CS2Backbone improvements:Hid NL_STRIDE option in SecondaryStructureAdded patch for gromacs 4.6.2Merge branch 'v2.0'Made fast RMSD the default when possible (align==displace)few changes in Driver to get it compiled with icpc on our clustersome regtest were broken. Now resettedgro format updated in driverAdded documentation to alphabetaupdate the How to move your input tutorialwrong sign in the derivatives of alphabetaregtest for alphabeta
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