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Created with Raphaël 2.2.027Jul2624232221201918171615131211109876228Jun2422212019141110754330May292726252421201412119872130Apr2726252419171615141312119865432130Mar2928262221201915764128Feb2726252322211986530Jan26252421191714131110919Dec18171514Small fixes to get example inputs in these files to runSmall changes to examples in MolInfo so they runMade changes to examples in Miscellaneous.md Please check these changesRemoved snipped input from ContactMapFixed documentation for LogMFD - please checkFixed examples in FuncPathMSDMade examples in manual for Metainference run.Changes to documentation for EDSFixed inputs for EDS so that they run with plumed. Please checkFixed example inputs for MaxEnt -- please checkMade it so that final jobs are not performed by driver when it is executed with --parse-onlyExplained how multiple replicas works for input testingAdded description of syntax checking for example inputs in developer manualFixed some spelling mistakes in the manualFixed spelling script so it doesn't trip up on auxfiles and plumedinclude fileschangelogMade some changes in examples here to make them run OK during testing.Redid testing script for multiple replica inputs using comment with number of replicas rather than separate environmentForce cython to be used when building from source.Set language_levelMore stuff on constantsMuch improved pandas implementationAllow plumed to convert strings to number in the cmd interfacepandas testDraft pandas readerFixed variable name for github tokenMerge branch 'v2.5'astyleMade prettier output for spelling script when run on command lineAdded stuff to check spelling in theoryfixed warningMerge branch 'v2.5'fixed warningMerge branch 'v2.5'same as 11bbf717186d66267ef95a3ca929fa83596ceda0Merge branch 'v2.5'cleaned up badges, added lgtmMerge branch 'v2.5'fixed typo in tutorialFixed script for spelling errors