Notice that before this fix the first sentence of the page was shown in
the summary ("Related Pages" page). Now it is not shown anymore, which is better.

To add a sentence for the summary (sort of subtitle), add a \brief command
(as in mdTemplate.md)

[makedoc]

See #239

[makedoc]

[makedoc]

a full explanation was already there.
I added a link to it

When you type [makedoc] the developer manual is updated online

a full explanation was already there.
I added a link to it

When you type [makedoc] the developer manual is updated online

I added some info about the automatic gzipping of directories.

[makedoc]

Also provided instructions in the developer manual on how to
create these files

Also took the opportunity to fix a couple of errors in other parts of the
developer documentation

Added a tool for generating template versions of the various collective
variables.  This involved changing the secondary structure variables
work (by default you now do LESS_THAN).  In addition, plumed now understands
that atoms can be specified in multiple ways sometimes.

Also changed the developer manual so as to make it easier to find the
tutorials

is an overlap integral between the current field and some reference
field ( this can be a sum of fields visited at previous times ala metadynamics ).
To test the derivatives of the field I changed calculateNumericalDerivatives
this routine can now be passed an ActionWithValue so that you can differentiate
objects where something other than a value is passed between Actions.  Currently
only histogram style field cvs are implemented.
Wrote documentation for FIELD keyword and for MOMENT keyword.  Also
rethought numbered keywords and so changed the keywords class a little bit
Changed number of decimal places in tests so that they worked on other
computers.  Also made test 23 much less expensive
Fixed a very persisent bug in field cvs - horay!!!

for specific tasks.  To reserve a keyword use keys.reserve() and to
then use it later use keys.user().  Currently the reserved keywords
are ARG and PERIODIC.

keyword registering is provided together with a description of how
to create the manual. Also fixed an error in the introduction to the
manual