Some class name fixed

Class providing actions should have the same name as the input directive

src/bias/Value.cpp

@@ -49,21 +49,21 @@ PRINT ARG=d1,d2,b.d1,b.d2
 */
 //+ENDPLUMEDOC
 
-class Value : public Bias{
+class BiasValue : public Bias{
 public:
-  Value(const ActionOptions&);
+  BiasValue(const ActionOptions&);
   void calculate();
   static void registerKeywords(Keywords& keys);
 };
 
-PLUMED_REGISTER_ACTION(Value,"BIASVALUE")
+PLUMED_REGISTER_ACTION(BiasValue,"BIASVALUE")
 
-void Value::registerKeywords(Keywords& keys){
+void BiasValue::registerKeywords(Keywords& keys){
   Bias::registerKeywords(keys);
   keys.use("ARG");
 }
 
-Value::Value(const ActionOptions&ao):
+BiasValue::BiasValue(const ActionOptions&ao):
 PLUMED_BIAS_INIT(ao)
 {
   checkRead();
@@ -77,7 +77,7 @@ PLUMED_BIAS_INIT(ao)
   }
 }
 
-void Value::calculate(){
+void BiasValue::calculate(){
 for(unsigned i=0;i< getNumberOfArguments() ;++i){
   double val; val=getArgument(i); 
 //  log<<"BIAS "<<val<<"\n";

src/setup/MolInfo.cpp

@@ -31,7 +31,9 @@ Anyway, it is registered here, so that excluding this module from
 compilation will exclude it from plumed.
 */
 
-PLUMED_REGISTER_ACTION(SetupMolInfo,"MOLINFO")
+typedef PLMD::SetupMolInfo MolInfo;
+
+PLUMED_REGISTER_ACTION(MolInfo,"MOLINFO")
 
 }
 }

src/vatom/GhostAtom.cpp → src/vatom/Ghost.cpp

@@ -51,24 +51,24 @@ PRINT ARG=d1
 //+ENDPLUMEDOC
 
 
-class GhostAtom:
+class Ghost:
   public ActionWithVirtualAtom
 {
   vector<double> coord;
 public:
-  GhostAtom(const ActionOptions&ao);
+  Ghost(const ActionOptions&ao);
   void calculate();
   static void registerKeywords( Keywords& keys );
 };
 
-PLUMED_REGISTER_ACTION(GhostAtom,"GHOST")
+PLUMED_REGISTER_ACTION(Ghost,"GHOST")
 
-void GhostAtom::registerKeywords(Keywords& keys){
+void Ghost::registerKeywords(Keywords& keys){
   ActionWithVirtualAtom::registerKeywords(keys);
   keys.add("atoms","COORDINATES","coordinates of the ghost atom in the local reference frame");
 }
 
-GhostAtom::GhostAtom(const ActionOptions&ao):
+Ghost::Ghost(const ActionOptions&ao):
   Action(ao),
   ActionWithVirtualAtom(ao)
 {
@@ -86,7 +86,7 @@ GhostAtom::GhostAtom(const ActionOptions&ao):
   requestAtoms(atoms);
 }
 
-void GhostAtom::calculate(){
+void Ghost::calculate(){
   Vector pos;
   vector<Tensor> deriv(getNumberOfAtoms());
   vector<Vector> n;