There was an error fetching the commit references. Please try again later.
Added dimensionality reduction algorithms (sketch-map + mds)
I have moved mds from the analysis module to a separate dimred module as I think it is best to keep this with the other dimensionality reduction algorithms. It is now default off though
Showing
- .travis.yml 1 addition, 1 deletion.travis.yml
- regtest/dimred/rt-mds/Makefile 1 addition, 0 deletionsregtest/dimred/rt-mds/Makefile
- regtest/dimred/rt-mds/analysis.0.list_embed.reference 101 additions, 0 deletionsregtest/dimred/rt-mds/analysis.0.list_embed.reference
- regtest/dimred/rt-mds/config 2 additions, 0 deletionsregtest/dimred/rt-mds/config
- regtest/dimred/rt-mds/in 11 additions, 0 deletionsregtest/dimred/rt-mds/in
- regtest/dimred/rt-mds/input.xyz 9 additions, 0 deletionsregtest/dimred/rt-mds/input.xyz
- regtest/dimred/rt-mds/list_embed.reference 101 additions, 0 deletionsregtest/dimred/rt-mds/list_embed.reference
- regtest/dimred/rt-mds/plumed.dat 29 additions, 0 deletionsregtest/dimred/rt-mds/plumed.dat
- src/.gitignore 1 addition, 0 deletionssrc/.gitignore
- src/dimred/.gitignore 9 additions, 0 deletionssrc/dimred/.gitignore
- src/dimred/ClassicalMultiDimensionalScaling.cpp 213 additions, 0 deletionssrc/dimred/ClassicalMultiDimensionalScaling.cpp
- src/dimred/DimensionalityReductionBase.cpp 147 additions, 0 deletionssrc/dimred/DimensionalityReductionBase.cpp
- src/dimred/DimensionalityReductionBase.h 78 additions, 0 deletionssrc/dimred/DimensionalityReductionBase.h
- src/dimred/Makefile 4 additions, 0 deletionssrc/dimred/Makefile
- src/dimred/ProjectNonLandmarkPoints.cpp 129 additions, 0 deletionssrc/dimred/ProjectNonLandmarkPoints.cpp
- src/dimred/SMACOF.cpp 94 additions, 0 deletionssrc/dimred/SMACOF.cpp
- src/dimred/SMACOF.h 39 additions, 0 deletionssrc/dimred/SMACOF.h
- src/dimred/SketchMapBase.cpp 128 additions, 0 deletionssrc/dimred/SketchMapBase.cpp
- src/dimred/SketchMapBase.h 86 additions, 0 deletionssrc/dimred/SketchMapBase.h
- src/dimred/SketchMapPointwise.cpp 112 additions, 0 deletionssrc/dimred/SketchMapPointwise.cpp
Loading
Please register or sign in to comment