A few more verbatim -> plumedfile

src/multicolvar/VolumeBetweenContours.cpp

@@ -49,11 +49,11 @@ The input below calculates a density field from the positions of atoms 1-14400.
 that are specified in the DENSITY action that are within a region where the density field is greater than
 2.0 is then calculated.
 
-\verbatim
+\plumedfile
 d1: DENSITY SPECIES=14401-74134:3 LOWMEM
 fi: INENVELOPE DATA=d1 ATOMS=1-14400 CONTOUR={RATIONAL D_0=2.0 R_0=1.0} BANDWIDTH=0.1,0.1,0.1 LOWMEM
 PRINT ARG=fi,rr.* FILE=colvar
-\endverbatim
+\endplumedfile
 
 */
 //+ENDPLUMEDOC

src/pamm/PAMM.cpp

@@ -59,13 +59,13 @@ looking through the example given below.
 
 In this example I will explain in detail what the following input is computing:
 
-\verbatim
+\plumedfile
 MOLINFO MOLTYPE=protein STRUCTURE=M1d.pdb
 psi: TORSIONS ATOMS1=@psi-2 ATOMS2=@psi-3 ATOMS3=@psi-4
 phi: TORSIONS ATOMS1=@phi-2 ATOMS2=@phi-3 ATOMS3=@phi-4
 p: PAMM DATA=phi,psi CLUSTERS=clusters.dat MEAN1={COMPONENT=1} MEAN2={COMPONENT=2}
 PRINT ARG=p.mean-1,mean-2 FILE=colvar
-\endverbatim
+\endplumedfile
 
 The best place to start our explanation is to look at the contents of the clusters.dat file