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Created with Raphaël 2.2.024Oct20171613119729Sep252423161413121110930Aug29282216155312Jul27Jun20Apr27Mar242217839Dec19Nov1124Feb321Jan16Dec25Nov51Oct10Sep8Jun26May252213109722Apr1624Mar232019181412987654326Feb2423222019181413111065430Jan2928241915Dec19Nov18Oct4224Sep12Jun528May16Apr1020Feb28Nov1512811Oct10330Aug252414116Jun14124May8427Apr23730Mar28262011128Feb272121Dec65428Nov18149627Oct1910622Sep21Delete gydb_arh_chdcr.fa.psqDelete gydb_arh_chdcr.fa.pinDelete gydb_arh_chdcr.fa.phrUpdate teGreedyNester_installation_v1.shbeta version of new module implementation tutorialUpdated readme for ltr discovery tool implementationadded module order cmd argumentMerge branch 'feature/custom-discovery-tool' of https://gitlab.fi.muni.cz/lexa/nested into feature/custom-discovery-toolremoved backwards edges in scoringgrapher: added autosizeDelete gydb_arh_chdcr.fa.ptoDelete gydb_arh_chdcr.fa.ptfDelete gydb_arh_chdcr.fa.potDelete gydb_arh_chdcr.fa.pdbUpdated protein domain db filesUpdated protein domain db filesgrapher: refactor; scaling tablegrapher: fixed couple bugscleanup round 4cleanup round 3cleanup round 2Merge branch 'master' of https://gitlab.fi.muni.cz/lexa/nestedcode cleanup round 1grapher: added to installer as nested-grapher commandgrapher: removing sequences without specified lengthgrapher: handling missing modulesUpdated protein domain db filesgrapher: nicer codegrapher: added csv table export; graph page titlegrapher: styling and scaling for multiple sequencesgrapher: added table; stylinggrapher: axis stylinggrapher: added TE family graph; merged graphs into one html filegrapher: stylinggrapher: added TE specific metricsgrapher: WIP coverage graphgrapher: change in data structure, fixed coverage computationgrapher: compute coverage for all modules per sequencegrapher: parsing input gffsadded TE annotation; changed variable names according to conventions