Commits · 9328f294a23c8376e208b2e19e0ea3a96872b66e · Matej Lexa / nested

Sep 09, 2022
- modules: fixed sketcher; fixed bug in output generators · 9328f294
  Ivan Vanat authored Sep 09, 2022
  
  9328f294
- modules: miteFinder fix output id · 4e77d509
  Ivan Vanat authored Sep 09, 2022
  
  4e77d509
Aug 30, 2022
- WIP modules: minor fixes; added plotly · cf40a4aa
  Ivan Vanat authored Aug 30, 2022
  
  cf40a4aa
Aug 29, 2022
- WIP modules: updated config template; fixed mite finder module; minor changes in output · 65d408c3
  Ivan Vanat authored Aug 29, 2022
  
  65d408c3
Aug 28, 2022
- modules: fixed wrong sequence range in gff; fixed indexing in solo ltr; minor refactor · 21caa450
  Ivan Vanat authored Aug 28, 2022
  
  21caa450
Aug 22, 2022
- WIP modules: added miteFinder module · 6a2640fe
  Ivan Vanat authored Aug 22, 2022
  
  6a2640fe
Aug 16, 2022
- modules: discovery tool working · 9828544c
  Ivan Vanat authored Aug 16, 2022
  
  9828544c
Aug 15, 2022
- modules - added sketcher and solo ltrs · 4895bfd2
  Ivan Vanat authored Aug 15, 2022
  
  4895bfd2
Aug 05, 2022
- added trf module · e913e354
  Ivan Vanat authored Aug 05, 2022
  
  e913e354
Aug 03, 2022
- WIP modules · e861c8e9
  Ivan Vanat authored Aug 03, 2022
  
  e861c8e9
Jul 12, 2022
- added forgotten fi · 3ad2c761
  Ivan Vanat authored Jul 12, 2022
  
  3ad2c761
- added trf to installation script and gitignore · 5c7ce7fb
  Ivan Vanat authored Jul 12, 2022
  
  5c7ce7fb
Mar 03, 2022
- Merge branch 'feature/custom-discovery-tool' of... · e70a5c63
  Pavel Jedlicka authored Mar 03, 2022
  e70a5c63
- WIP modules · 555c48a1
  Pavel Jedlicka authored Mar 03, 2022
  
  555c48a1
Nov 11, 2021
- cleanup after solo_ltr and trf; correct solo_ltr numbering · b69bdbc2
  Ivan Vanát authored Nov 11, 2021
  
  b69bdbc2
Feb 24, 2021
- Merge branch 'feature/custom-discovery-tool' of... · b3de6c8e
  Ivan Vanát authored Feb 24, 2021
  b3de6c8e
- fixed trf filtering · 102d1d7c
  Pavel Jedlicka authored Feb 24, 2021
  
  102d1d7c
Feb 03, 2021
- Merge branch 'feature/custom-discovery-tool' of... · ba6e9b25
  Ivan Vanát authored Feb 03, 2021
  ba6e9b25
- fixed trf; added output · 65e2f929
  Pavel Jedlicka authored Feb 03, 2021
  
  65e2f929
Jan 21, 2021
- Merge branch 'feature/custom-discovery-tool' of... · b9c572e4
  Ivan Vanát authored Jan 21, 2021
  b9c572e4
- fixed conflict · ac6d073f
  Ivan Vanát authored Jan 21, 2021
  
  ac6d073f
Dec 16, 2020
- tadnem repeat finder integrated not tested properly yet · 86e4fdf4
  Pavel Jedlicka authored Dec 16, 2020
  
  86e4fdf4
Nov 25, 2020
- fixed chromo domain overlap with ltr · 6fc973ec
  Pavel Jedlicka authored Nov 25, 2020
  
  6fc973ec
Nov 05, 2020
- added check for ram usage and appropriate warning message · 41a0a417
  Pavel Jedlicka authored Nov 05, 2020
  
  41a0a417
Oct 01, 2020
- cant have nested repo · cb1fd5ff
  Pavel Jedlicka authored Oct 01, 2020
  
  cb1fd5ff
- updated gitignore · 3e42ece4
  Pavel Jedlicka authored Oct 01, 2020
  
  3e42ece4
- added ram tracker · 35c664d9
  Pavel Jedlicka authored Oct 01, 2020
  
  35c664d9
Sep 10, 2020
- LTRharvest implemented; can add more discovery tools · 64f80f3b
  Pavel Jedlicka authored Sep 10, 2020
  
  64f80f3b
Jun 08, 2020
- Update README.md Added virtual machine section · d693a0de
  Matej Lexa authored Jun 08, 2020
  
  d693a0de
May 26, 2020
- Update teGreedyNester_installation_v1.sh · d4dd9de5
  Pavel Jedlicka authored May 26, 2020
  
  d4dd9de5
- Update teGreedyNester_installation_v1.sh · 55cb46c8
  Pavel Jedlicka authored May 26, 2020
  
  55cb46c8
- Upload New File · 6f59a28d
  Pavel Jedlicka authored May 26, 2020
  
  6f59a28d
May 25, 2020
- Update teGreedyNester_installation.py · ec377525
  Pavel Jedlicka authored May 25, 2020
  
  ec377525
May 22, 2020
- Update teGreedyNester_installation.py · 83876235
  Pavel Jedlicka authored May 22, 2020
  
  83876235
- Update teGreedyNester_installation.py · 49500ca4
  Pavel Jedlicka authored May 22, 2020
  
  49500ca4
- Upload New File · ea74a7e0
  Pavel Jedlicka authored May 22, 2020
  
  ea74a7e0
- Update config_template.yml · 0eaed7ae
  Pavel Jedlicka authored May 22, 2020
  
  0eaed7ae
May 09, 2020
- fixed permission check for non-existing output folder · 30ca8d1f
  Ivan Vanát authored May 09, 2020
  
  30ca8d1f
May 07, 2020
- Merge branch 'master' of https://gitlab.fi.muni.cz/lexa/nested · 5a8784f3
  Ivan Vanát authored May 07, 2020
  
  5a8784f3
- deleted unused arguments; added output directory validation · 582e0068
  Ivan Vanát authored May 07, 2020
  
  582e0068