Commits · 555c48a1fe49750b9fb4479b2e29ff3c03c0c840 · Matej Lexa / nested

Mar 03, 2022
- WIP modules · 555c48a1
  Pavel Jedlicka authored Mar 03, 2022
  
  555c48a1
Feb 24, 2021
- fixed trf filtering · 102d1d7c
  Pavel Jedlicka authored Feb 24, 2021
  
  102d1d7c
Feb 03, 2021
- fixed trf; added output · 65e2f929
  Pavel Jedlicka authored Feb 03, 2021
  
  65e2f929
Dec 16, 2020
- tadnem repeat finder integrated not tested properly yet · 86e4fdf4
  Pavel Jedlicka authored Dec 16, 2020
  
  86e4fdf4
Nov 25, 2020
- fixed chromo domain overlap with ltr · 6fc973ec
  Pavel Jedlicka authored Nov 25, 2020
  
  6fc973ec
Nov 05, 2020
- added check for ram usage and appropriate warning message · 41a0a417
  Pavel Jedlicka authored Nov 05, 2020
  
  41a0a417
Oct 01, 2020
- cant have nested repo · cb1fd5ff
  Pavel Jedlicka authored Oct 01, 2020
  
  cb1fd5ff
- updated gitignore · 3e42ece4
  Pavel Jedlicka authored Oct 01, 2020
  
  3e42ece4
- added ram tracker · 35c664d9
  Pavel Jedlicka authored Oct 01, 2020
  
  35c664d9
Sep 10, 2020
- LTRharvest implemented; can add more discovery tools · 64f80f3b
  Pavel Jedlicka authored Sep 10, 2020
  
  64f80f3b
May 25, 2020
- Update teGreedyNester_installation.py · ec377525
  Pavel Jedlicka authored May 25, 2020
  
  ec377525
May 22, 2020
- Update teGreedyNester_installation.py · 83876235
  Pavel Jedlicka authored May 22, 2020
  
  83876235
- Update teGreedyNester_installation.py · 49500ca4
  Pavel Jedlicka authored May 22, 2020
  
  49500ca4
- Upload New File · ea74a7e0
  Pavel Jedlicka authored May 22, 2020
  
  ea74a7e0
- Update config_template.yml · 0eaed7ae
  Pavel Jedlicka authored May 22, 2020
  
  0eaed7ae
May 09, 2020
- fixed permission check for non-existing output folder · 30ca8d1f
  Ivan Vanát authored May 09, 2020
  
  30ca8d1f
May 07, 2020
- Merge branch 'master' of https://gitlab.fi.muni.cz/lexa/nested · 5a8784f3
  Ivan Vanát authored May 07, 2020
  
  5a8784f3
- deleted unused arguments; added output directory validation · 582e0068
  Ivan Vanát authored May 07, 2020
  
  582e0068
Feb 18, 2020
- Replace TEnesterInstallationProcedure.pdf · 87057a68
  Pavel Jedlicka authored Feb 18, 2020
  
  87057a68
Feb 14, 2020
- Update README.md added link to TEgnester virtual machine at... · e5f39437
  Matej Lexa authored Feb 14, 2020
```
Update README.md added link to TEgnester virtual machine at http://hedron.fi.muni.cz/TE-nester_Mint.zip
```
  e5f39437
- Update README.md · 879aa94c
  Matej Lexa authored Feb 14, 2020
  
  879aa94c
- Update README.md - added PYTONPATH note · 50f039a7
  Matej Lexa authored Feb 14, 2020
  
  50f039a7
- Update README.md · 1500bf24
  Matej Lexa authored Feb 14, 2020
  
  1500bf24
- Update README.md for user space installation of BLAST · a1af8d75
  Matej Lexa authored Feb 14, 2020
  
  a1af8d75
- Update README.md to better show the need for creating config.yml · e9f7e39c
  Matej Lexa authored Feb 14, 2020
  
  e9f7e39c
- Update README.md for user-space installation of GenomeTools · eaddeb9d
  Matej Lexa authored Feb 14, 2020
  
  eaddeb9d
- Update README.md · ed633fc7
  Matej Lexa authored Feb 14, 2020
  
  ed633fc7
- Update README.md to precise user-space installation procedure. · 7169ee36
  Matej Lexa authored Feb 14, 2020
  
  7169ee36
Feb 13, 2020
- Update setup.sh · ef50d2d8
  Pavel Jedlicka authored Feb 13, 2020
  
  ef50d2d8
- Update config.py · 565c108b
  Pavel Jedlicka authored Feb 13, 2020
  
  565c108b
- Update config.py · eca80fb0
  Pavel Jedlicka authored Feb 13, 2020
  
  eca80fb0
- Update config.py · 40d33fc2
  Pavel Jedlicka authored Feb 13, 2020
  
  40d33fc2
- Update config.py · 09c39dfb
  Pavel Jedlicka authored Feb 13, 2020
  
  09c39dfb
- Update config.py · 158a4a1e
  Pavel Jedlicka authored Feb 13, 2020
  
  158a4a1e
- Update setup.sh · ed4ae016
  Pavel Jedlicka authored Feb 13, 2020
  
  ed4ae016
- Update setup.sh · 820b7a8f
  Pavel Jedlicka authored Feb 13, 2020
  
  820b7a8f
- Update setup.sh · 3f2ad081
  Pavel Jedlicka authored Feb 13, 2020
  
  3f2ad081
- Update config.py · ee51b09f
  Pavel Jedlicka authored Feb 13, 2020
  
  ee51b09f
- Update config.py · ffe55038
  Pavel Jedlicka authored Feb 13, 2020
  
  ffe55038
Feb 11, 2020
- Update README.md · cd6a4c15
  Matej Lexa authored Feb 11, 2020
  
  cd6a4c15