Commits · master · Matej Lexa / coronavirus

Oct 12, 2020
- Merge branch 'feature/auto-download-and-improvements' into 'master' · 85b528d9
  Matej Lexa authored Oct 12, 2020
```
feat: download file, added index with map, optimised imports

See merge request !9
```
  85b528d9
Oct 05, 2020
- feat: download file, added index with map, optimised imports · c20fa91b
  Daniel Plakinger authored Oct 05, 2020
  
  c20fa91b
Sep 23, 2020
- Merge branch 'feature/map' into 'master' · 8e603570
  Matej Lexa authored Sep 23, 2020
```
Added map and graph of sequences

Closes #1

See merge request !8
```
  8e603570
- Added map and graph of sequences · d1caa042
  Daniel Plakinger authored Sep 23, 2020
  
  d1caa042
- Merge branch 'alex/pg2' into 'master' · 0ce8603e
  Alexandra Stanová authored Sep 23, 2020
```
add more description, change words

See merge request !7
```
  0ce8603e
- add more description, change words · 829fd1eb
  Alexandra Stanova authored Sep 23, 2020
  
  829fd1eb
Sep 21, 2020
- Merge branch 'alex/page2' into 'master' · 33cba618
  Alexandra Stanová authored Sep 21, 2020
```
page2: add solution using hmmer

See merge request !6
```
  33cba618
- page2: add solution using hmmer · 32effea2
  Alexandra Stanova authored Sep 21, 2020
```
add solution using hmmer
```
  32effea2
Aug 29, 2020
- Merge branch 'master' of https://gitlab.fi.muni.cz/lexa/coronavirus · 18314ca2
  Ondřej Lošťák authored Aug 29, 2020
  
  18314ca2
- page4 - Phylogenetic trees · 9ea0b45f
  Ondřej Lošťák authored Aug 29, 2020
  
  9ea0b45f
Aug 10, 2020
- Merge branch 'alex/corona_update' into 'master' · 4027e738
  Alexandra Stanová authored Aug 10, 2020
```
page 2 phmm update

See merge request !5
```
  4027e738
- page 2 phmm update · f57e1dbe
  Alexandra Stanova authored Aug 10, 2020
  
  f57e1dbe
Jun 05, 2020
- extended x-axis to 100 in page6.Rmd · 5f2db086
  Matej Lexa authored Jun 05, 2020
  
  5f2db086
May 14, 2020
- Code to accomodate the change from column name Country.Region to country in coronavirus data · b71e110c
  Matej Lexa authored May 14, 2020
  
  b71e110c
May 04, 2020
- Adjusted scales on page6.Rmd graphs to show longer time periods · b263c80f
  Matej Lexa authored May 04, 2020
  
  b263c80f
May 03, 2020
- page2 initial commit · 5834596e
  Alexandra Stanova authored May 03, 2020
  
  5834596e
Apr 27, 2020
- Update README.md Added UK data link, includes a link to MSA and a phylogenetic tree · 768f8f82
  Matej Lexa authored Apr 27, 2020
  
  768f8f82
Apr 20, 2020
- Merge branch 'master' of https://gitlab.fi.muni.cz/lexa/coronavirus · 310d6266
  Matej Lexa authored Apr 20, 2020
  
  310d6266
- Adjusted thresholds to make the graphs less cluttered with countries · 37898a62
  Matej Lexa authored Apr 20, 2020
  
  37898a62
Apr 07, 2020
- Update README.md Added link to a paper on coronaviruses. · f9744e06
  Matej Lexa authored Apr 07, 2020
  
  f9744e06
Apr 05, 2020
- Update README.md Added nextstrain annotation data in JSON format · 71589cb6
  Matej Lexa authored Apr 05, 2020
  
  71589cb6
- Update README.md Added a link to coronavirus genome browser · 6fddf9a3
  Matej Lexa authored Apr 05, 2020
  
  6fddf9a3
- Merge branch 'master' of https://gitlab.fi.muni.cz/lexa/coronavirus · 3e569b49
  Matej Lexa authored Apr 05, 2020
  
  3e569b49
- Added sliding window figures to page6.Rmd, fixed a few things · 2147dc20
  Matej Lexa authored Apr 05, 2020
  
  2147dc20
Apr 03, 2020
- Update README.md Added video link · a1403364
  Matej Lexa authored Apr 03, 2020
  
  a1403364
Apr 02, 2020
- Fixed scales to prettier labels · a3fe3667
  Matej Lexa authored Apr 02, 2020
  
  a3fe3667
Mar 31, 2020
- Resized figures on page6.Rmd · a9ea060e
  Matej Lexa authored Mar 31, 2020
  
  a9ea060e
- Resized figures on page6.Rmd · dbd0eb7b
  Matej Lexa authored Mar 31, 2020
  
  dbd0eb7b
Mar 30, 2020
- Added credit to R code author · 059f8b8c
  Matej Lexa authored Mar 30, 2020
  
  059f8b8c
- Added visualization to time series · 59543a2f
  Matej Lexa authored Mar 30, 2020
  
  59543a2f
- Added page7.html to the website yaml file · 65536d5c
  Matej Lexa authored Mar 30, 2020
  
  65536d5c
- Merge branch 'page7' into 'master' · 83b8f72e
  Matej Lexa authored Mar 30, 2020
```
added page with interactive map

See merge request !3
```
  83b8f72e
Mar 29, 2020
- added page with interactive map · 177e929a
  Juraj.SKandera authored Mar 29, 2020
  
  177e929a
Mar 28, 2020
- initial commit page4 · bea8d39b
  Ondřej Lošťák authored Mar 28, 2020
  
  bea8d39b
- Fixed error in page6.Rmd / replaced min with max · 33b6af8f
  Matej Lexa authored Mar 28, 2020
  
  33b6af8f
- Fixed error in page6.Rmd / missing = symbol · b12fa40b
  Matej Lexa authored Mar 28, 2020
  
  b12fa40b
- Added page6.Rmd with summary tables from the coronavirus package · a26cc3c6
  Matej Lexa authored Mar 28, 2020
  
  a26cc3c6
- Merge branch 'master' of https://gitlab.fi.muni.cz/lexa/coronavirus · a0b7857f
  Matej Lexa authored Mar 28, 2020
  
  a0b7857f
- README.md · 5b0ddb69
  Matej Lexa authored Mar 28, 2020
  
  5b0ddb69
Mar 27, 2020
- Update README.md Added a link to coronavirus from CRAN · 4145165a
  Matej Lexa authored Mar 27, 2020
  
  4145165a