Commit 310d6266 authored by Matej Lexa's avatar Matej Lexa
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parents 37898a62 f9744e06
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[Daily data from ECDC](https://ecdc.europa.eu/en/publications-data/download-todays-data-geographic-distribution-covid-19-cases-worldwide)

[UCSC Genome Browser - coronavirus page](http://genome.ucsc.edu/goldenPath/newsarch.html#040320)

[Nextstrain annotation data](http://data.nextstrain.org/ncov.json)

## Software

[HMMER 3.0](http://hmmer.org/)
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[SARS-CoV-2 protein alignments](http://slim.icr.ac.uk/proviz/)

[Coronaviruses 101 video](https://www.youtube.com/watch?v=8_bOhZd6ieM)

[Boni et al., 2020. Evolutionary origins of the SARS-CoV-2 sarbecovirus lineage responsible for the COVID-19 pandemic](https://www.biorxiv.org/content/10.1101/2020.03.30.015008v1)