Commit d9dffd81 authored by Vladimír Ulman's avatar Vladimír Ulman
Browse files

ADD: Introduced RemoveFromMask() to aid removing stuff from masks.

parent d887c773

src/main_Generator.cpp

+17 −10
Original line number Diff line number Diff line
@@ -69,6 +69,7 @@ std::vector<int> centreOffsets; 


bool LoadNewMesh(const char* path,const int ID,const int fileNo,const bool keepTrajectories=false);

int  RenderMesh(const char* path,const int ID,int fileNo);

void RemoveFromMask(i3d::Image3d<i3d::GRAY16>& mask, const i3d::GRAY16 val);



int main(int argc,char **argv)

{
@@ -636,17 +637,8 @@ int RenderMesh(const char* path,const int ID,int fileNo) 
			else

			{

				//tip is not visible

				int removedCnt=0;



				//remove all voxels of this color (tipIter->first)

				i3d::GRAY16* p = mask.GetFirstVoxelAddr();

				i3d::GRAY16* const pL = p + mask.GetImageSize();

				while (p != pL)

				{

					if (*p == tipIter->first) { *p=0; ++removedCnt; }

					++p;

				}

				std::cout << "WARN: REMOVING " << removedCnt << " PIXELS of filopodium ID " << tipIter->first << "\n";

				RemoveFromMask(mask, (i3d::GRAY16)tipIter->first);



				// declare the filopodium is not present in this time point

				tipIter->second.at((unsigned)fileNo)=-1;
@@ -669,3 +661,18 @@ int RenderMesh(const char* path,const int ID,int fileNo) 


	return(0);

}



void RemoveFromMask(i3d::Image3d<i3d::GRAY16>& mask, const i3d::GRAY16 val)

{

	int removedCnt=0;



	i3d::GRAY16* p = mask.GetFirstVoxelAddr();

	i3d::GRAY16* const pL = p + mask.GetImageSize();

	while (p != pL)

	{

		if (*p == val) { *p=0; ++removedCnt; }

		++p;

	}



	std::cout << "WARN: REMOVING " << removedCnt << " PIXELS of filopodium ID " << val << "\n";

}