Commit 3612cb37 authored by Vladimír Ulman's avatar Vladimír Ulman
Browse files

FIX: improved comments and removed obsoleted ones in function ActiveMesh::InitDots_filo()

parent bafde34d

src/TriangleMesh.cpp

+5 −14
Original line number Original line Diff line number Diff line
@@ -1538,7 +1538,6 @@ void ActiveMesh::InitDots_filo(const i3d::Image3d<i3d::GRAY16>& mask,const unsig 
   // get the resolution of image

   // get the resolution of image

	i3d::Vector3d<float> res = mask.GetResolution().GetRes();

	i3d::Vector3d<float> res = mask.GetResolution().GetRes();

	float max_res = std::max(res.x, std::max(res.y, res.z)); // ... pixels/micron

	float max_res = std::max(res.x, std::max(res.y, res.z)); // ... pixels/micron

	// OBSOLETE: const int density = 10; // ... how may dots should be pressed between two neighbouring pixel positions

	

	

	//syntactic short-cut to the proper filopodium geometry data

	//syntactic short-cut to the proper filopodium geometry data

	mesh_t& filoMesh=Ftree[idx];

	mesh_t& filoMesh=Ftree[idx];
@@ -1553,13 +1552,9 @@ void ActiveMesh::InitDots_filo(const i3d::Image3d<i3d::GRAY16>& mask,const unsig 




		const float length=(tP-fP).Len(); // segment length in microns

		const float length=(tP-fP).Len(); // segment length in microns





		// discrete stepping

		// discrete stepping, in fact: how many steps there will be for this particular one segment

		const int S = (int) ceil(length * max_res * (this->configFile.filoAxisOrientedDensity));

		const int S = (int) ceil(length * max_res * (this->configFile.filoAxisOrientedDensity));





		/// OBSOLETE - with magic factor

		//stepping along the axis 

		// const int S=(int)ceil(5.f*length/0.005); //"fraction factor"



		for (int s=0; s < S; ++s)

		for (int s=0; s < S; ++s)

		{

		{

			//ratios "from" and "to"

			//ratios "from" and "to"
@@ -1576,14 +1571,10 @@ void ActiveMesh::InitDots_filo(const i3d::Image3d<i3d::GRAY16>& mask,const unsig 
			Vector3F p =fS*fP;

			Vector3F p =fS*fP;

			         p+=tS*tP;

			         p+=tS*tP;





			// OBSOLETE - magic factor

			// The number of dots should correspond the width (radius) of filopodium

			//insert fl. dots

			// multiplied by given density. The density should be a large number, as the

//			float dotsCount=400000.f*r;

			// radius is typically very small, to obtain many dots overhere.



			// Also, the number of dotsCount here is cca 5-times downscaled to the very final count.

			// the number of dots should correspond the width (radius) of filopodium

			// multiplied by given density. The density should be a large number as the

			// radius is typically very small

			// OBSOLETE: const int dotDensity = 15;

		   float dotsCount = (this->configFile.filoContourOrientedDensity) * r;

		   float dotsCount = (this->configFile.filoContourOrientedDensity) * r;





			// prevent data overflow (5 - multiplicity of addition)

			// prevent data overflow (5 - multiplicity of addition)