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Added beginings of extensions so that we can calculate more complicated contact matrices
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- src/adjmat/AdjacencyMatrixBase.cpp 9 additions, 0 deletionssrc/adjmat/AdjacencyMatrixBase.cpp
- src/adjmat/AdjacencyMatrixBase.h 3 additions, 0 deletionssrc/adjmat/AdjacencyMatrixBase.h
- src/adjmat/AdjacencyMatrixVessel.cpp 18 additions, 24 deletionssrc/adjmat/AdjacencyMatrixVessel.cpp
- src/adjmat/AdjacencyMatrixVessel.h 7 additions, 23 deletionssrc/adjmat/AdjacencyMatrixVessel.h
- src/adjmat/DFSBasic.cpp 0 additions, 2 deletionssrc/adjmat/DFSBasic.cpp
- src/multicolvar/MultiColvarBase.cpp 3 additions, 1 deletionsrc/multicolvar/MultiColvarBase.cpp
- src/vesselbase/ActionWithVessel.cpp 4 additions, 0 deletionssrc/vesselbase/ActionWithVessel.cpp
- src/vesselbase/ActionWithVessel.h 2 additions, 0 deletionssrc/vesselbase/ActionWithVessel.h
- src/vesselbase/StoreDataVessel.cpp 33 additions, 45 deletionssrc/vesselbase/StoreDataVessel.cpp
- src/vesselbase/StoreDataVessel.h 15 additions, 1 deletionsrc/vesselbase/StoreDataVessel.h
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