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Commit c521126a authored by Giovanni Bussi's avatar Giovanni Bussi
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Small fixes in doc

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......@@ -233,7 +233,7 @@ For users:
## Version 2.4.6 ()
For users:
- Fixed a bug in \ref COORDINATIONNUMBER where derivatives were wrong when using R_POWER > 2, thanks to @MoleOrbitalHybridAnalyst for spotting and fixing
- Fixed a bug in \ref COORDINATIONNUMBER where derivatives were wrong when using R_POWER > 2, thanks to `@MoleOrbitalHybridAnalyst` for spotting and fixing
- Fixed a bug in library search, possibly affecting linked blas/lapack on OSX (see \issue{476}).
- Fixed a bug in \ref METAD with `TARGET` and `GRID_SPARSE` (see \issue{467}).
......@@ -175,7 +175,7 @@ PRINT ARG=dp,cn FILE=COLVAR STRIDE=100
\endplumedfile
Now measure the speed of your simulation. You should see some overhead due to PLUMED.
You can now try to use multiple-time-stepping \cite{Ferrarotti2015}.
You can now try to use multiple-time-stepping \cite Ferrarotti2015.
To do so add a `STRIDE` option to the \ref RESTRAINT line.
You can also use the \ref EFFECTIVE_ENERGY_DRIFT action to print a kind of "total energy drift" due to the application
of the PLUMED bias. In molecular dynamics simulation you usually monitor the drift in the total energy in order to choose the
......@@ -214,7 +214,7 @@ Using a `STRIDE=2` instead the effective energy will be very stable
Let's try to perform a metadynamics simulation biasing the coordination number and
the distance between the magnesium ion and the phosphate. Parameters are similar to those used in \cite{cunha2017unraveling},
the distance between the magnesium ion and the phosphate. Parameters are similar to those used in \cite cunha2017unraveling,
although we use here a shorter deposition pace in order to artificially increase the computational cost.
\plumedfile
......
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