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Martin Kurečka
Plumed AlphaFold
Commits
b5a4d2ca
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Commit
b5a4d2ca
authored
5 years ago
by
Giovanni Bussi
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Merge branch 'v2.4' into v2.5
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04f8ee11
483cf10c
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scripts/partial_tempering.sh
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@@ -40,8 +40,8 @@ plumed partial_tempering \$scale < processed.top > topol\$i.top
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@@ -40,8 +40,8 @@ plumed partial_tempering \$scale < processed.top > topol\$i.top
WARNING: It's not very robust and there might be force-field dependent issues!
WARNING: It's not very robust and there might be force-field dependent issues!
A few tests are strongly suggested.
A few tests are strongly suggested.
WARNING: This script only works if the
`
awk
`
command in your system corresponds to
WARNING: This script only works if the awk command in your system corresponds to
GNU awk.
`
mawk
`
, that is the default on Ubuntu 19, does not work correctly.
GNU awk. mawk, that is the default on Ubuntu 19, does not work correctly.
1. Compare partial_tempering with scale=1.0 to non-scaled force field. E.g.
1. Compare partial_tempering with scale=1.0 to non-scaled force field. E.g.
grompp -o topol-unscaled.tpr
grompp -o topol-unscaled.tpr
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