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Further cleanup
I moved around stuff related to the total energy, in such a way that energy CV is less different from the others. I also clarified the main flux in PlumedMain with several comments
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- src/ActionAtomistic.cpp 2 additions, 0 deletionssrc/ActionAtomistic.cpp
- src/ActionAtomistic.h 20 additions, 6 deletionssrc/ActionAtomistic.h
- src/Atoms.cpp 1 addition, 1 deletionsrc/Atoms.cpp
- src/Atoms.h 0 additions, 1 deletionsrc/Atoms.h
- src/Colvar.cpp 1 addition, 1 deletionsrc/Colvar.cpp
- src/ColvarEnergy.cpp 1 addition, 1 deletionsrc/ColvarEnergy.cpp
- src/PlumedMain.cpp 44 additions, 45 deletionssrc/PlumedMain.cpp
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