Commits · c639206e94b217efdc2d80b92f16e0822a6453f7 · Matej Lexa / nested

Browse files

Aug 01, 2018
- fixed drift issue by removing -1 and +1 in TE cropping in nester.py · c639206e
  Matej Lexa authored Aug 01, 2018
  
  c639206e
Jun 16, 2018
- Merge pull request #21 from rlapar/indices-fix · f26b88e0
  rlapar authored Jun 16, 2018
  f26b88e0
- indices fix · fd032021
  rlapar authored Jun 16, 2018
  
  fd032021
- Merge pull request #20 from rlapar/include-tsd · 7bbc588c
  rlapar authored Jun 16, 2018
  7bbc588c
- full fasta output · 72414463
  rlapar authored Jun 16, 2018
  
  72414463
- fasta file offset · e5e59278
  rlapar authored Jun 16, 2018
  
  e5e59278
- tsr included without scoring · 50fe627e
  rlapar authored Jun 16, 2018
  
  50fe627e
Jun 14, 2018
- Merge pull request #19 from rlapar/bug-fix · 82e6d1ce
  rlapar authored Jun 14, 2018
  82e6d1ce
- formatting · f07f4f90
  rlapar authored Jun 14, 2018
  
  f07f4f90
- LTR location expand · 1ef1c7b2
  rlapar authored Jun 14, 2018
  
  1ef1c7b2
Jun 01, 2018
- Merge pull request #18 from rlapar/gff-fix · c99bf3c4
  rlapar authored Jun 01, 2018
  c99bf3c4
- fasta naming fix · 8960ed6b
  rlapar authored Jun 01, 2018
  
  8960ed6b
May 24, 2018
- Merge pull request #17 from rlapar/cli-fix · 24a29a3a
  rlapar authored May 24, 2018
  24a29a3a
- Nester CLI fix · d474916f
  rlapar authored May 24, 2018
  
  d474916f
May 08, 2018
- Merge pull request #16 from rlapar/gff-format · 2190fa1f
  rlapar authored May 08, 2018
  2190fa1f
- gff format: +pbs, ppt, ltr · 715f3fb2
  rlapar authored May 08, 2018
  
  715f3fb2
May 04, 2018
- requirements fix (yaml) · 476665c5
  rlapar authored May 04, 2018
  
  View commits for tag v1.0 v1.0
  
  476665c5
Apr 27, 2018
- Merge pull request #15 from rlapar/gff-fix · 6e88e563
  rlapar authored Apr 27, 2018
  6e88e563
- bug fix: domain location changed locally · 7d8d6600
  rlapar authored Apr 27, 2018
  
  7d8d6600
- gff config generate · f15b2f77
  rlapar authored Apr 27, 2018
  
  f15b2f77
Apr 23, 2018
- Merge pull request #14 from rlapar/gff-format · d0301e2d
  rlapar authored Apr 23, 2018
  d0301e2d
- gff format · 7b793087
  rlapar authored Apr 23, 2018
  
  7b793087
Apr 07, 2018
- Merge pull request #12 from rlapar/external-config · 0ede79fa
  rlapar authored Apr 07, 2018
  0ede79fa
- Update README.md · 81ed799b
  rlapar authored Apr 07, 2018
  
  81ed799b
- external config · 24e3efa4
  rlapar authored Apr 07, 2018
  
  24e3efa4
Mar 30, 2018
- logging bug patch · 97fea768
  rlapar authored Mar 30, 2018
  
  97fea768
- Merge pull request #11 from rlapar/logging · 27a4d012
  rlapar authored Mar 30, 2018
  27a4d012
- removed imports · 44a64c4f
  rlapar authored Mar 30, 2018
  
  44a64c4f
- logging module · 6887edbe
  rlapar authored Mar 30, 2018
  
  6887edbe
Mar 28, 2018
- Merge pull request #10 from rlapar/paralel-crop · e10030c9
  rlapar authored Mar 28, 2018
  e10030c9
Mar 26, 2018
- paralel crop · 9f532f61
  rlapar authored Mar 26, 2018
  
  9f532f61
Mar 20, 2018
- remove main · ccd3edb1
  rlapar authored Mar 20, 2018
  
  ccd3edb1
- Merge pull request #9 from rlapar/install · b1bf9fee
  rlapar authored Mar 20, 2018
  b1bf9fee
- setuptools · a4ca8760
  rlapar authored Mar 20, 2018
  
  a4ca8760
Mar 11, 2018
- Merge pull request #8 from rlapar/generator · 0ec1e3e6
  rlapar authored Mar 11, 2018
  0ec1e3e6
- filepath escape · f056357a
  rlapar authored Mar 11, 2018
  
  f056357a
Mar 01, 2018
- generator · a4ded428
  rlapar authored Mar 01, 2018
  
  a4ded428
Feb 28, 2018
- generator · c600325b
  rlapar authored Feb 28, 2018
  
  c600325b
- cleanup · 38027b64
  rlapar authored Feb 28, 2018
  
  38027b64
- refactoring · 974a8bfe
  rlapar authored Feb 28, 2018
  
  974a8bfe