Commits · aef715bc8ef47a97db817a4caa6e86ec6f2d9c5c · Matej Lexa / nested

Browse files

Nov 27, 2022
- documentation · aef715bc
  Ivan Vanat authored Nov 27, 2022
  
  aef715bc
- rename BaseOutputGenerator -> OutputGeneratorInterface · b71e4bcf
  Ivan Vanat authored Nov 27, 2022
  
  b71e4bcf
Nov 19, 2022
- not running blastx if no TEs found · f1071024
  Ivan Vanat authored Nov 19, 2022
  
  f1071024
- nester: added console log; dependency_resolver: crash prevention · 628192ab
  Ivan Vanat authored Nov 19, 2022
  
  628192ab
Nov 18, 2022
- fixed typo in installation script · e377c7bc
  Ivan Vanat authored Nov 18, 2022
  
  e377c7bc
- remove static method · f7f3dadc
  Ivan Vanat authored Nov 18, 2022
  
  f7f3dadc
- resolving discovery tool in Gene · da65efa6
  Ivan Vanat authored Nov 18, 2022
  
  da65efa6
Nov 11, 2022
- updated readme with new class name · 1812af0c
  Ivan Vanat authored Nov 11, 2022
  
  1812af0c
- executor sorting new elements · 58d4e352
  Ivan Vanat authored Nov 11, 2022
  
  58d4e352
- code style; added module based colors to config template · a317cd32
  Ivan Vanat authored Nov 11, 2022
  
  a317cd32
Nov 04, 2022
- grapher: added autorange · c6e4f9cf
  Ivan Vanat authored Nov 04, 2022
  
  c6e4f9cf
Oct 31, 2022
- Delete gydb_arh_chdcr.fa.psq · 42077f05
  Ivan Vanát authored Oct 31, 2022
  
  42077f05
- Delete gydb_arh_chdcr.fa.pin · 4b3cad41
  Ivan Vanát authored Oct 31, 2022
  
  4b3cad41
- Delete gydb_arh_chdcr.fa.phr · 63e25310
  Ivan Vanát authored Oct 31, 2022
  
  63e25310
- graph refactored · 50a1b585
  Ivan Vanat authored Oct 31, 2022
  
  50a1b585
Oct 29, 2022
- Fixes in README · 10a23b63
  Ivan Vanát authored Oct 29, 2022
  
  10a23b63
- Updated new module implementation section in README · 6d0dff8e
  Ivan Vanát authored Oct 29, 2022
  
  6d0dff8e
Oct 28, 2022
- added new line in solo ltrs spliced fasta · d778fd2e
  Ivan Vanat authored Oct 28, 2022
  
  d778fd2e
Oct 27, 2022
- Update config_template.yml · 7686416c
  Pavel Jedlicka authored Oct 27, 2022
  
  7686416c
Oct 20, 2022
- beta version of new module implementation tutorial · 704390b2
  Ivan Vanat authored Oct 20, 2022
  
  704390b2
- Updated readme for ltr discovery tool implementation · b3786c08
  Ivan Vanat authored Oct 20, 2022
  
  b3786c08
- added module order cmd argument · 1386b970
  Ivan Vanat authored Oct 20, 2022
  
  1386b970
- Merge branch 'feature/custom-discovery-tool' of... · 1e89d66d
  Ivan Vanat authored Oct 20, 2022
  1e89d66d
- removed backwards edges in scoring · f8db12f9
  Ivan Vanat authored Oct 20, 2022
  
  f8db12f9
- grapher: added autosize · d3580c53
  Ivan Vanat authored Oct 20, 2022
  
  d3580c53
- Delete gydb_arh_chdcr.fa.pto · c0974211
  Pavel Jedlicka authored Oct 20, 2022
  
  c0974211
- Delete gydb_arh_chdcr.fa.ptf · bd7c904b
  Pavel Jedlicka authored Oct 20, 2022
  
  bd7c904b
- Delete gydb_arh_chdcr.fa.pot · 23aa7818
  Pavel Jedlicka authored Oct 20, 2022
  
  23aa7818
- Delete gydb_arh_chdcr.fa.pdb · d44dc291
  Pavel Jedlicka authored Oct 20, 2022
  
  d44dc291
- Updated protein domain db files · c4829765
  jedlickap authored Oct 20, 2022
  
  c4829765
- Updated protein domain db files · f79a9607
  jedlickap authored Oct 20, 2022
  
  f79a9607
Oct 17, 2022
- grapher: refactor; scaling table · 9327bf90
  Ivan Vanat authored Oct 17, 2022
  
  9327bf90
Oct 16, 2022
- grapher: fixed couple bugs · 7a14ec99
  Ivan Vanat authored Oct 16, 2022
  
  7a14ec99
Oct 13, 2022
- cleanup round 4 · cb1d0fe5
  Ivan Vanat authored Oct 13, 2022
  
  cb1d0fe5
- cleanup round 3 · 5c50561c
  Ivan Vanat authored Oct 13, 2022
  
  5c50561c
- cleanup round 2 · 0265737d
  Ivan Vanat authored Oct 13, 2022
  
  0265737d
Oct 09, 2022
- code cleanup round 1 · 1c54c320
  Ivan Vanat authored Oct 09, 2022
  
  1c54c320
Oct 07, 2022
- grapher: added to installer as nested-grapher command · 2dc1b080
  Ivan Vanat authored Oct 07, 2022
  
  2dc1b080
- grapher: removing sequences without specified length · 2d1d7dcd
  Ivan Vanat authored Oct 07, 2022
  
  2d1d7dcd
- grapher: handling missing modules · 44c9ed96
  Ivan Vanat authored Oct 07, 2022
  
  44c9ed96