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Commit e38c95f3 authored by rlapar's avatar rlapar
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gene dict

parent b9257842
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from gt.core import *
from gt.extended import *
from gt.annotationsketch import *
from gt.annotationsketch.custom_track import CustomTrack
from gt.core.gtrange import Range
import sys
style = {}
def visualize(transposon):
print transposon
gene = FeatureNode.create_new('test', "gene", 0, 60000, "+")
t = FeatureNode.create_new('test', "exon", transposon['Location'][0], transposon['Location'][1], "+")
gene.add_child(t)
pngfile = 'test.png'
style = Style()
diagram = Diagram.from_array([gene], Range(1, 1000), style)
layout = Layout(diagram, 600, style)
height = layout.get_height()
canvas = CanvasCairoFile(style, 600, height)
layout.sketch(canvas)
canvas.to_file(pngfile)
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