/* * This file is part of the GROMACS molecular simulation package. * * Copyright (c) 1991-2000, University of Groningen, The Netherlands. * Copyright (c) 2001-2004, The GROMACS development team. * Copyright (c) 2011,2012,2013,2014,2015,2017, by the GROMACS development team, led by * Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl, * and including many others, as listed in the AUTHORS file in the * top-level source directory and at http://www.gromacs.org. * * GROMACS is free software; you can redistribute it and/or * modify it under the terms of the GNU Lesser General Public License * as published by the Free Software Foundation; either version 2.1 * of the License, or (at your option) any later version. * * GROMACS is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with GROMACS; if not, see * http://www.gnu.org/licenses, or write to the Free Software Foundation, * Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. * * If you want to redistribute modifications to GROMACS, please * consider that scientific software is very special. Version * control is crucial - bugs must be traceable. We will be happy to * consider code for inclusion in the official distribution, but * derived work must not be called official GROMACS. Details are found * in the README & COPYING files - if they are missing, get the * official version at http://www.gromacs.org. * * To help us fund GROMACS development, we humbly ask that you cite * the research papers on the package. Check out http://www.gromacs.org. */ #ifndef _repl_ex_h #define _repl_ex_h #include <cstdio> #include "gromacs/utility/basedefinitions.h" #include "gromacs/utility/real.h" struct gmx_enerdata_t; struct gmx_multisim_t; struct t_commrec; struct t_inputrec; class t_state; /* The parameters for the replica exchange algorithm */ struct ReplicaExchangeParameters { ReplicaExchangeParameters() : exchangeInterval(0), numExchanges(0), randomSeed(-1) { }; int exchangeInterval; /* Interval in steps at which to attempt exchanges, 0 means no replica exchange */ int numExchanges; /* The number of exchanges to attempt at an exchange step */ int randomSeed; /* The random seed, -1 means generate a seed */ }; /* Abstract type for replica exchange */ typedef struct gmx_repl_ex *gmx_repl_ex_t; gmx_repl_ex_t init_replica_exchange(FILE *fplog, const gmx_multisim_t *ms, int numAtomsInSystem, const t_inputrec *ir, const ReplicaExchangeParameters &replExParams); /* Should only be called on the master ranks */ gmx_bool replica_exchange(FILE *fplog, const t_commrec *cr, gmx_repl_ex_t re, t_state *state, const gmx_enerdata_t *enerd, t_state *state_local, gmx_int64_t step, real time); /* Attempts replica exchange, should be called on all ranks. * Returns TRUE if this state has been exchanged. * When running each replica in parallel, * this routine collects the state on the master rank before exchange. * With domain decomposition, the global state after exchange is stored * in state and still needs to be redistributed over the ranks. */ void print_replica_exchange_statistics(FILE *fplog, gmx_repl_ex_t re); /* Should only be called on the master ranks */ #endif /* _repl_ex_h */