From f92b93037407093d876c165de4ec7bebb35c0879 Mon Sep 17 00:00:00 2001
From: Gareth Tribello <gareth.tribello@gmail.com>
Date: Sat, 27 Jul 2019 19:51:48 +0200
Subject: [PATCH] Removed snipped input from ContactMap
---
src/colvar/ContactMap.cpp | 11 +++++------
1 file changed, 5 insertions(+), 6 deletions(-)
diff --git a/src/colvar/ContactMap.cpp b/src/colvar/ContactMap.cpp
index 64b4a0d62..cf6226c96 100644
--- a/src/colvar/ContactMap.cpp
+++ b/src/colvar/ContactMap.cpp
@@ -86,17 +86,16 @@ WEIGHT is the 1/(number of contacts) giving equal weight to each contact.
When using native contact Q switch function, please cite \cite best2013
\plumedfile
-# Full example available in regtest/basic/rt72/
+# The full (much-longer) example available in regtest/basic/rt72/
CONTACTMAP ...
ATOMS1=1,67 SWITCH1={Q R_0=0.01 BETA=50.0 LAMBDA=1.5 REF=0.4059} WEIGHT1=0.003597
ATOMS2=1,68 SWITCH2={Q R_0=0.01 BETA=50.0 LAMBDA=1.5 REF=0.4039} WEIGHT2=0.003597
ATOMS3=1,69 SWITCH3={Q R_0=0.01 BETA=50.0 LAMBDA=1.5 REF=0.3215} WEIGHT3=0.003597
-[snip]
-ATOMS275=183,213 SWITCH275={Q R_0=0.01 BETA=50.0 LAMBDA=1.5 REF=0.355} WEIGHT275=0.003597
-ATOMS276=183,234 SWITCH276={Q R_0=0.01 BETA=50.0 LAMBDA=1.5 REF=0.428} WEIGHT276=0.003597
-ATOMS277=183,250 SWITCH277={Q R_0=0.01 BETA=50.0 LAMBDA=1.5 REF=0.3832} WEIGHT277=0.003597
-ATOMS278=197,220 SWITCH278={Q R_0=0.01 BETA=50.0 LAMBDA=1.5 REF=0.3827} WEIGHT278=0.003597
+ATOMS4=5,61 SWITCH4={Q R_0=0.01 BETA=50.0 LAMBDA=1.5 REF=0.4277} WEIGHT4=0.003597
+ATOMS5=5,67 SWITCH5={Q R_0=0.01 BETA=50.0 LAMBDA=1.5 REF=0.3851} WEIGHT5=0.003597
+ATOMS6=5,68 SWITCH6={Q R_0=0.01 BETA=50.0 LAMBDA=1.5 REF=0.3811} WEIGHT6=0.003597
+ATOMS7=5,69 SWITCH7={Q R_0=0.01 BETA=50.0 LAMBDA=1.5 REF=0.3133} WEIGHT7=0.003597
LABEL=cmap
SUM
... CONTACTMAP
--
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