From f05f6b9d6c00e68b2b7cea0a7974aa32fd9f92f2 Mon Sep 17 00:00:00 2001
From: Giovanni Bussi <giovanni.bussi@gmail.com>
Date: Wed, 27 Jan 2016 16:51:28 +0100
Subject: [PATCH] regtest

---
 regtest/basic/rt66/model.pdb | 136 +++++++++++++++++------------------
 1 file changed, 68 insertions(+), 68 deletions(-)

diff --git a/regtest/basic/rt66/model.pdb b/regtest/basic/rt66/model.pdb
index 4c5509e6a..f95ef2565 100644
--- a/regtest/basic/rt66/model.pdb
+++ b/regtest/basic/rt66/model.pdb
@@ -1,39 +1,39 @@
-ATOM      1  OP3   G A   1      -8.886  -5.163   9.647  1.00 10.00           O  
-ATOM      2  P     G A   1     -10.305  -4.745  10.229  1.00 10.00           P  
-ATOM      3  OP1   G A   1     -10.282  -3.296  10.528  1.00 10.00           O  
-ATOM      4  OP2   G A   1     -10.676  -5.703  11.297  1.00 10.00           O  
-ATOM      5  O5'   G A   1     -11.278  -4.981   8.995  1.00 10.00           O  
-ATOM      6  C5'   G A   1     -11.721  -6.288   8.650  1.00 10.00           C  
-ATOM      7  C4'   G A   1     -12.147  -6.326   7.203  1.00 10.00           C  
-ATOM      8  O4'   G A   1     -12.908  -5.127   6.888  1.00 10.00           O  
-ATOM      9  C3'   G A   1     -11.018  -6.335   6.182  1.00 10.00           C  
-ATOM     10  O3'   G A   1     -10.515  -7.653   5.962  1.00 10.00           O  
-ATOM     11  C2'   G A   1     -11.723  -5.799   4.944  1.00 10.00           C  
-ATOM     12  O2'   G A   1     -12.510  -6.802   4.329  1.00 10.00           O  
-ATOM     13  C1'   G A   1     -12.629  -4.732   5.557  1.00 10.00           C  
-ATOM     14  N9    G A   1     -12.034  -3.399   5.553  1.00 10.00           N  
-ATOM     15  C8    G A   1     -11.489  -2.711   6.611  1.00 10.00           C  
-ATOM     16  N7    G A   1     -11.046  -1.527   6.284  1.00 10.00           N  
-ATOM     17  C5    G A   1     -11.312  -1.423   4.927  1.00 10.00           C  
-ATOM     18  C6    G A   1     -11.054  -0.361   4.015  1.00 10.00           C  
-ATOM     19  O6    G A   1     -10.507   0.731   4.237  1.00 10.00           O  
-ATOM     20  N1    G A   1     -11.485  -0.666   2.727  1.00 10.00           N  
-ATOM     21  C2    G A   1     -12.087  -1.852   2.372  1.00 10.00           C  
-ATOM     22  N2    G A   1     -12.458  -1.970   1.092  1.00 10.00           N  
-ATOM     23  N3    G A   1     -12.332  -2.848   3.209  1.00 10.00           N  
-ATOM     24  C4    G A   1     -11.921  -2.569   4.462  1.00 10.00           C  
-ATOM     25  H5'   G A   1     -12.563  -6.573   9.280  1.00 10.00           H  
-ATOM     26 H5''   G A   1     -10.912  -7.004   8.797  1.00 10.00           H  
-ATOM     27  H4'   G A   1     -12.711  -7.248   7.052  1.00 10.00           H  
-ATOM     28  H3'   G A   1     -10.174  -5.722   6.495  1.00 10.00           H  
-ATOM     29  H2'   G A   1     -11.003  -5.354   4.261  1.00 10.00           H  
-ATOM     30 HO2'   G A   1     -12.189  -7.645   4.657  1.00 10.00           H  
-ATOM     31  H1'   G A   1     -13.571  -4.664   5.013  1.00 10.00           H  
-ATOM     32  H8    G A   1     -11.428  -3.106   7.613  1.00 10.00           H  
-ATOM     33  H1    G A   1     -11.349   0.031   2.006  1.00 10.00           H  
-ATOM     34  H21   G A   1     -12.916  -2.812   0.775  1.00 10.00           H  
-ATOM     35  H22   G A   1     -12.281  -1.215   0.436  1.00 10.00           H  
-ATOM     36 HO5'   G A   1      -8.546  -4.409   9.152  1.00 10.00           H  
+ATOM      1  OP3  G5 A   1      -8.886  -5.163   9.647  1.00 10.00           O  
+ATOM      2  P    G5 A   1     -10.305  -4.745  10.229  1.00 10.00           P  
+ATOM      3  OP1  G5 A   1     -10.282  -3.296  10.528  1.00 10.00           O  
+ATOM      4  OP2  G5 A   1     -10.676  -5.703  11.297  1.00 10.00           O  
+ATOM      5  O5'  G5 A   1     -11.278  -4.981   8.995  1.00 10.00           O  
+ATOM      6  C5'  G5 A   1     -11.721  -6.288   8.650  1.00 10.00           C  
+ATOM      7  C4'  G5 A   1     -12.147  -6.326   7.203  1.00 10.00           C  
+ATOM      8  O4'  G5 A   1     -12.908  -5.127   6.888  1.00 10.00           O  
+ATOM      9  C3'  G5 A   1     -11.018  -6.335   6.182  1.00 10.00           C  
+ATOM     10  O3'  G5 A   1     -10.515  -7.653   5.962  1.00 10.00           O  
+ATOM     11  C2'  G5 A   1     -11.723  -5.799   4.944  1.00 10.00           C  
+ATOM     12  O2'  G5 A   1     -12.510  -6.802   4.329  1.00 10.00           O  
+ATOM     13  C1'  G5 A   1     -12.629  -4.732   5.557  1.00 10.00           C  
+ATOM     14  N9   G5 A   1     -12.034  -3.399   5.553  1.00 10.00           N  
+ATOM     15  C8   G5 A   1     -11.489  -2.711   6.611  1.00 10.00           C  
+ATOM     16  N7   G5 A   1     -11.046  -1.527   6.284  1.00 10.00           N  
+ATOM     17  C5   G5 A   1     -11.312  -1.423   4.927  1.00 10.00           C  
+ATOM     18  C6   G5 A   1     -11.054  -0.361   4.015  1.00 10.00           C  
+ATOM     19  O6   G5 A   1     -10.507   0.731   4.237  1.00 10.00           O  
+ATOM     20  N1   G5 A   1     -11.485  -0.666   2.727  1.00 10.00           N  
+ATOM     21  C2   G5 A   1     -12.087  -1.852   2.372  1.00 10.00           C  
+ATOM     22  N2   G5 A   1     -12.458  -1.970   1.092  1.00 10.00           N  
+ATOM     23  N3   G5 A   1     -12.332  -2.848   3.209  1.00 10.00           N  
+ATOM     24  C4   G5 A   1     -11.921  -2.569   4.462  1.00 10.00           C  
+ATOM     25  H5'  G5 A   1     -12.563  -6.573   9.280  1.00 10.00           H  
+ATOM     26 H5''  G5 A   1     -10.912  -7.004   8.797  1.00 10.00           H  
+ATOM     27  H4'  G5 A   1     -12.711  -7.248   7.052  1.00 10.00           H  
+ATOM     28  H3'  G5 A   1     -10.174  -5.722   6.495  1.00 10.00           H  
+ATOM     29  H2'  G5 A   1     -11.003  -5.354   4.261  1.00 10.00           H  
+ATOM     30 HO2'  G5 A   1     -12.189  -7.645   4.657  1.00 10.00           H  
+ATOM     31  H1'  G5 A   1     -13.571  -4.664   5.013  1.00 10.00           H  
+ATOM     32  H8   G5 A   1     -11.428  -3.106   7.613  1.00 10.00           H  
+ATOM     33  H1   G5 A   1     -11.349   0.031   2.006  1.00 10.00           H  
+ATOM     34  H21  G5 A   1     -12.916  -2.812   0.775  1.00 10.00           H  
+ATOM     35  H22  G5 A   1     -12.281  -1.215   0.436  1.00 10.00           H  
+ATOM     36 HO5'  G5 A   1      -8.546  -4.409   9.152  1.00 10.00           H  
 ATOM     37  P     G A   2      -8.988  -7.880   5.507  1.00 10.00           P  
 ATOM     38  OP1   G A   2      -8.686  -9.325   5.633  1.00 10.00           O  
 ATOM     39  OP2   G A   2      -8.145  -6.905   6.232  1.00 10.00           O  
@@ -417,35 +417,35 @@ ATOM    416  H41   C A  13      -6.637   1.715   2.673  1.00 10.00           H
 ATOM    417  H42   C A  13      -6.049   3.299   3.135  1.00 10.00           H  
 ATOM    418  H5    C A  13      -5.978   5.174   1.596  1.00 10.00           H  
 ATOM    419  H6    C A  13      -6.450   5.904  -0.678  1.00 10.00           H  
-ATOM    420  P     C A  14     -11.305   6.637  -3.832  1.00 10.00           P  
-ATOM    421  OP1   C A  14     -11.962   7.571  -4.780  1.00 10.00           O  
-ATOM    422  OP2   C A  14     -11.431   6.869  -2.377  1.00 10.00           O  
-ATOM    423  O5'   C A  14     -11.808   5.161  -4.143  1.00 10.00           O  
-ATOM    424  C5'   C A  14     -13.112   4.922  -4.663  1.00 10.00           C  
-ATOM    425  C4'   C A  14     -13.622   3.588  -4.169  1.00 10.00           C  
-ATOM    426  O4'   C A  14     -12.520   2.854  -3.574  1.00 10.00           O  
-ATOM    427  C3'   C A  14     -14.674   3.659  -3.070  1.00 10.00           C  
-ATOM    428  O3'   C A  14     -15.991   3.705  -3.611  1.00 10.00           O  
-ATOM    429  C2'   C A  14     -14.482   2.356  -2.306  1.00 10.00           C  
-ATOM    430  O2'   C A  14     -15.290   1.338  -2.855  1.00 10.00           O  
-ATOM    431  C1'   C A  14     -13.001   2.029  -2.530  1.00 10.00           C  
-ATOM    432  N1    C A  14     -12.184   2.249  -1.324  1.00 10.00           N  
-ATOM    433  C2    C A  14     -11.946   1.174  -0.464  1.00 10.00           C  
-ATOM    434  O2    C A  14     -12.406   0.059  -0.751  1.00 10.00           O  
-ATOM    435  N3    C A  14     -11.223   1.370   0.662  1.00 10.00           N  
-ATOM    436  C4    C A  14     -10.741   2.581   0.946  1.00 10.00           C  
-ATOM    437  N4    C A  14     -10.055   2.731   2.082  1.00 10.00           N  
-ATOM    438  C5    C A  14     -10.965   3.696   0.087  1.00 10.00           C  
-ATOM    439  C6    C A  14     -11.685   3.488  -1.025  1.00 10.00           C  
-ATOM    440  H5'   C A  14     -13.081   4.917  -5.753  1.00 10.00           H  
-ATOM    441 H5''   C A  14     -13.791   5.707  -4.333  1.00 10.00           H  
-ATOM    442  H4'   C A  14     -14.083   3.074  -5.013  1.00 10.00           H  
-ATOM    443  H3'   C A  14     -14.562   4.543  -2.444  1.00 10.00           H  
-ATOM    444 HO3'   C A  14     -16.384   2.837  -3.445  1.00 10.00           H  
-ATOM    445  H2'   C A  14     -14.683   2.511  -1.244  1.00 10.00           H  
-ATOM    446 HO2'   C A  14     -14.748   0.549  -2.916  1.00 10.00           H  
-ATOM    447  H1'   C A  14     -12.855   0.995  -2.848  1.00 10.00           H  
-ATOM    448  H41   C A  14      -9.891   1.935   2.685  1.00 10.00           H  
-ATOM    449  H42   C A  14      -9.693   3.638   2.337  1.00 10.00           H  
-ATOM    450  H5    C A  14     -10.552   4.682   0.317  1.00 10.00           H  
-ATOM    451  H6    C A  14     -11.877   4.323  -1.696  1.00 10.00           H  
+ATOM    420  P    C3 A  14     -11.305   6.637  -3.832  1.00 10.00           P  
+ATOM    421  OP1  C3 A  14     -11.962   7.571  -4.780  1.00 10.00           O  
+ATOM    422  OP2  C3 A  14     -11.431   6.869  -2.377  1.00 10.00           O  
+ATOM    423  O5'  C3 A  14     -11.808   5.161  -4.143  1.00 10.00           O  
+ATOM    424  C5'  C3 A  14     -13.112   4.922  -4.663  1.00 10.00           C  
+ATOM    425  C4'  C3 A  14     -13.622   3.588  -4.169  1.00 10.00           C  
+ATOM    426  O4'  C3 A  14     -12.520   2.854  -3.574  1.00 10.00           O  
+ATOM    427  C3'  C3 A  14     -14.674   3.659  -3.070  1.00 10.00           C  
+ATOM    428  O3'  C3 A  14     -15.991   3.705  -3.611  1.00 10.00           O  
+ATOM    429  C2'  C3 A  14     -14.482   2.356  -2.306  1.00 10.00           C  
+ATOM    430  O2'  C3 A  14     -15.290   1.338  -2.855  1.00 10.00           O  
+ATOM    431  C1'  C3 A  14     -13.001   2.029  -2.530  1.00 10.00           C  
+ATOM    432  N1   C3 A  14     -12.184   2.249  -1.324  1.00 10.00           N  
+ATOM    433  C2   C3 A  14     -11.946   1.174  -0.464  1.00 10.00           C  
+ATOM    434  O2   C3 A  14     -12.406   0.059  -0.751  1.00 10.00           O  
+ATOM    435  N3   C3 A  14     -11.223   1.370   0.662  1.00 10.00           N  
+ATOM    436  C4   C3 A  14     -10.741   2.581   0.946  1.00 10.00           C  
+ATOM    437  N4   C3 A  14     -10.055   2.731   2.082  1.00 10.00           N  
+ATOM    438  C5   C3 A  14     -10.965   3.696   0.087  1.00 10.00           C  
+ATOM    439  C6   C3 A  14     -11.685   3.488  -1.025  1.00 10.00           C  
+ATOM    440  H5'  C3 A  14     -13.081   4.917  -5.753  1.00 10.00           H  
+ATOM    441 H5''  C3 A  14     -13.791   5.707  -4.333  1.00 10.00           H  
+ATOM    442  H4'  C3 A  14     -14.083   3.074  -5.013  1.00 10.00           H  
+ATOM    443  H3'  C3 A  14     -14.562   4.543  -2.444  1.00 10.00           H  
+ATOM    444 HO3'  C3 A  14     -16.384   2.837  -3.445  1.00 10.00           H  
+ATOM    445  H2'  C3 A  14     -14.683   2.511  -1.244  1.00 10.00           H  
+ATOM    446 HO2'  C3 A  14     -14.748   0.549  -2.916  1.00 10.00           H  
+ATOM    447  H1'  C3 A  14     -12.855   0.995  -2.848  1.00 10.00           H  
+ATOM    448  H41  C3 A  14      -9.891   1.935   2.685  1.00 10.00           H  
+ATOM    449  H42  C3 A  14      -9.693   3.638   2.337  1.00 10.00           H  
+ATOM    450  H5   C3 A  14     -10.552   4.682   0.317  1.00 10.00           H  
+ATOM    451  H6   C3 A  14     -11.877   4.323  -1.696  1.00 10.00           H  
-- 
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