diff --git a/patches/namd-2.8.config b/patches/namd-2.8.config index e36c9fb19ac0d1fb8e16b1d7ef0b2eb1e3c9258b..12035dda6680a2925bd28b1e20efd1bd31b6fd36 100644 --- a/patches/namd-2.8.config +++ b/patches/namd-2.8.config @@ -11,8 +11,10 @@ cat << EOF To enable PLUMED in a NAMD simulation one should add the following lines in the NAMD configuration file (often named as xxx.namd or xxx.conf) and run the plumed-patched version of NAMD with it: +\verbatim plumed on -plumed plumed.dat +plumedfile plumed.dat +\endverbatim The first line tells NAMD to run with PLUMED and the second line specifies the PLUMED input file. diff --git a/patches/namd-2.9.config b/patches/namd-2.9.config index 5086c057738f02678c64459ab9207c99b988a962..352a7ba8b562a7499a13de23ac7d68fba3c662dc 100644 --- a/patches/namd-2.9.config +++ b/patches/namd-2.9.config @@ -11,8 +11,10 @@ cat << EOF To enable PLUMED in a NAMD simulation one should add the following lines in the NAMD configuration file (often named as xxx.namd or xxx.conf) and run the plumed-patched version of NAMD with it: +\verbatim plumed on -plumed plumed.dat +plumedfile plumed.dat +\endverbatim The first line tells NAMD to run with PLUMED and the second line specifies the PLUMED input file.