diff --git a/user-doc/tutorials/belfast-4.txt b/user-doc/tutorials/belfast-4.txt index 3a5841b87775163338fa842cf43be8f6d158cbe7..3531956e6a18c6cc342554fcef3f1f07ae31f907 100644 --- a/user-doc/tutorials/belfast-4.txt +++ b/user-doc/tutorials/belfast-4.txt @@ -425,7 +425,7 @@ can be mixed and it is not necessary to keep track of which restraint was used t every single frame. Let's get the concatenated trajectory \verbatim -trjcat -cat -f traj*.xtc -o alltraj.xtc +gmx_mpi trjcat -cat -f traj*.xtc -o alltraj.xtc \endverbatim Now we should compute the value of each of the bias potentials on the entire (concatenated) trajectory diff --git a/user-doc/tutorials/belfast-7.txt b/user-doc/tutorials/belfast-7.txt index 1cd873611feecfca77b41158ef96582e1929a64f..b81abd651fd9751472c1e852a54e96533b9542c3 100644 --- a/user-doc/tutorials/belfast-7.txt +++ b/user-doc/tutorials/belfast-7.txt @@ -177,7 +177,7 @@ so there seems not to be any problem on this side. We can use the second file to reconstruct the continuous trajectories of each replica in temperature: \verbatim -trjcat_mpi -f traj0.trr traj1.trr -demux replica_index.xvg +gmx_mpi trjcat -f traj0.trr traj1.trr -demux replica_index.xvg \endverbatim and the following PLUMED input file (plumed_demux.dat) to recalculate the value of the CVs on the demuxed trajectories,