From 7a98298cb909610be11bffeace7d4b433c8df0b5 Mon Sep 17 00:00:00 2001
From: Giovanni Bussi <giovanni.bussi@gmail.com>
Date: Sun, 28 Jul 2013 16:33:57 +0200
Subject: [PATCH] Changed reference to plumed 1 paper
I moved the reference together with the others (using cite()) so that
it is more visible. I also updated a bit the description
---
src/core/PlumedMain.cpp | 10 +++-------
1 file changed, 3 insertions(+), 7 deletions(-)
diff --git a/src/core/PlumedMain.cpp b/src/core/PlumedMain.cpp
index 65fcb2583..48bce35e5 100644
--- a/src/core/PlumedMain.cpp
+++ b/src/core/PlumedMain.cpp
@@ -363,15 +363,11 @@ void PlumedMain::init(){
if(!log.isOpen()) log.link(stdout);
log<<"PLUMED is starting\n";
log<<"PLUMED compiled on " __DATE__ " at " __TIME__ "\n";
- log<<"**** THIS IS AN EXPERIMENTAL VERSION ****\n";
- log<<"More info on Google group 'plumed2-git'\n";
log<<"There is not yet a published paper describing this software.\n";
log<<"If you use it in a publication please explicitly state\n";
- log<<"which version you are using and cite the previous paper:\n";
- log<<" M. Bonomi, D. Branduardi, G. Bussi, C. Camilloni, D. Provasi, P. Raiteri,\n";
- log<<" D. Donadio, F. Marinelli, F. Pietrucci, R. A. Broglia and M. Parrinello\n";
- log<<" PLUMED: a portable plugin for free-energy calculations with molecular dynamics\n";
- log<<" Comp. Phys. Comm. 180, 1961 (2009)\n";
+ log<<"which version you are using and cite the previous paper ";
+ log<<cite("Bonomi, Branduardi, Bussi, Camilloni, Provasi, Raiteri, Donadio, Marinelli, Pietrucci,\n Broglia and Parrinello, Comp. Phys. Comm. 180, 1961 (2009)");
+ log<<"\n";
log<<"For further information see the PLUMED web page at www.plumed-code.org\n";
log.printf("Molecular dynamics engine: %s\n",MDEngine.c_str());
log.printf("Precision of reals: %d\n",atoms.getRealPrecision());
--
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