diff --git a/user-doc/tutorials/aa-lugano-6b.txt b/user-doc/tutorials/aa-lugano-6b.txt index 311f2d162f6db6335ee6445cce3e65770b6abe2f..fb56db608e5ecff929b8df08c446fa61031f7262 100644 --- a/user-doc/tutorials/aa-lugano-6b.txt +++ b/user-doc/tutorials/aa-lugano-6b.txt @@ -70,7 +70,7 @@ you might use something like this: \verbatim gnuplot> set pm3d map -gnuplot> p "fes.dat" u 1:2:3 +gnuplot> sp "fes.dat" u 1:2:3 \endverbatim You should obtain a plot similar to this one: @@ -97,7 +97,7 @@ WRAPAROUND AROUND=c ATOMS=mg WRAPAROUND AROUND=c ATOMS=@water GROUPBY=__FILL__ # dump your trajectory -DUMPATOMS ATOMS=@mdatoms FILE=whole.xtc STRIDE=10 +DUMPATOMS ATOMS=@mdatoms FILE=whole.xtc # writing all atoms you will be able to reuse the same pdb for opening. # e.g. vmd conf.pdb whole.xtc \endplumedfile