Commit cd6a4c15 authored by Matej Lexa's avatar Matej Lexa
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Update README.md

parent f6b13405
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+4 −2
Original line number Original line Diff line number Diff line
@@ -71,7 +71,7 @@ sudo ./setup.sh
#### For user-space installation of TE-greedy-nester call:
#### For user-space installation of TE-greedy-nester call:


```
```
sudo ./setup.sh --user
./setup.sh --user
```
```




@@ -87,7 +87,9 @@ Before usage, **config.yml** needs to be set up:
- blastx protein database (installed together with TE-greedy-nester)
- blastx protein database (installed together with TE-greedy-nester)
- blastx arguments
- blastx arguments


**Note**: `config.yml` is located by default in directory `/etc/nested/.`
**Note**: `config.yml` is located by default in directory `/etc/nested/.` after 
normal installation or `~/.local/etc/nested/.` after user space installation 
using the --user switch with setup.sh or setup.py 


## Usage
## Usage
```
```