Commit 31378861 authored by Marie Krátká's avatar Marie Krátká
Browse files

python3.10 compatible dependencies

parent 085222de
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+1 −1
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#!/usr/bin/env python3
import math
from typing import List, Optional, Dict, Union, NoReturn, Type
from collections import Iterable
from collections.abc import Iterable

from nested.utils import intervals

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# this version is just copied from a different branch, probably won't work as is
from setuptools import setup, find_packages

import nested
@@ -9,18 +10,16 @@ setup(
    author=nested.__author__,
    packages=find_packages(),
    install_requires=[
        'bcbio-gff==0.6.4',
        'biopython==1.70',
        'click==6.7',
        'networkx==2.1',
        'PyYAML==3.12',
        'plotly==5.10.0'
        'bcbio-gff>=0.6.4',
        'biopython>=1.70',
        'click>=6.7',
        'networkx>=2.7',
        'PyYAML>=3.13,<6.0'
    ],
    entry_points={
        'console_scripts': [
            'nested-generator=nested.cli.generator:main',
            'nested-nester=nested.cli.nester:main',
            'nested-grapher=nested.nester_grapher.grapher:main'
            'nested-nester=nested.cli.nester:main'
        ]
    }
)