Commit 43ac2b80 authored by Vladimír Ulman's avatar Vladimír Ulman
Browse files

COS: pimped the findMaxDilation code and service script

parent 1fd78b11

findMaxDilation.cpp

+2 −2
Original line number Diff line number Diff line
@@ -41,7 +41,7 @@ bool reduceMarkers(const i3d::Image3d<VT>& traIn, i3d::Image3d<VT>& traOut, cons 
	{

		//copy out the label from traOut, CCA on it, remove non-largest CC in the traOut image

		//std::cout << "found label: " << label << " (volume=" << sizesOfMarkers[label] << ")\n";

		if (sizesOfMarkers[label] < 500)

		if (sizesOfMarkers[label] < 1000)

		{

			std::cout << "label " << label << ": too small (" << sizesOfMarkers[label] << ") to be reduced\n";

			//have to restore it again (because the out image is already eroded)
@@ -136,7 +136,7 @@ int main(int argc, char** argv) 
	{

		sprintf(fn,"/temp/reduced_%03d.tif",erosionRound);

		std::cout << "managed and saving: " << fn << "\n";

		//reducedTraImg.SaveImage(fn);

		reducedTraImg.SaveImage(fn);



		//TODO: test against resImg

findMaxDilationForVideo.sh

+2 −2
Original line number Diff line number Diff line
@@ -14,7 +14,7 @@ for i in `seq 0 64`; do 
	echo "--------------------------------- $i ---------------------------------"



	tp=`printf %03d $i`

	./findMaxDilation  Fluo-N2DH-SIM+/01_GT/TRA/man_track${tp}.tif fakeRes.tif

	./findMaxDilation  01/silverGT_ulman/gtReference/Fluo-N2DH-SIM+/01_GT/TRA/man_track${tp}.tif  fakeRes.tif

	erosion=$?



	if [ $erosion -lt $smallestErosion ]; then smallestErosion=$erosion; fi